Gene Tpau_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0408 
Symbol 
ID9154543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp428252 
End bp429337 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content68% 
IMG OID 
Productmycothiol-dependent formaldehyde dehydrogenase 
Protein accessionYP_003645388 
Protein GI296138145 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAGG TCGTTCGAGG AGTCGTCGCG CGAGCGAAGG GCGAGCCCAC CTCGGTGGTG 
CCCATCGTGA TCCCCGATCC TGGACCGGGT GAGGTGGTCG TCTCGGTGCA GGCCTGCGGT
GTGTGCCACA CCGATCTGCA TTACCGCGAG GGCGGCATCA ACGACGAGTT CCCGTTCTTG
TTGGGGCACG AGGCCGCCGG CGTCGTCGAG TCCGTCGGCG AGGGGGTGGA TCACGTGGCG
CCCGGCGACT TCGTGGTGCT CAACTGGCGC GCCGTGTGCG GTCAGTGCCG CGCCTGCAAG
CGGGGTAAGC CGCAATACTG CTTCGACACG TTCAACGCCA CCCAGAAGAT GACCCTCGAA
GACGGTACCG AGCTCTCGCC GGCCCTCGGA ATCGGCGCTT TCGCCGAGAA GACCCTGGTG
CACCAGGGGC AGTGCACCCG CGTCGACGCC ACCGCGGATC CGGCGGTGGT GGGTCTGCTC
GGCTGCGGTG TGATGGCCGG ACTCGGCGCC GCGGTCAACA CCGGCGGTGT CTCCCGCGGC
GATACCGTCG CGGTGATCGG TTGCGGCGGT GTGGGAGACG CGGCCATCGC GGGTGCTCGT
CTGGTGGGGG CGCGCACCAT CATCGCGGTC GACCGTGACC CGAAGAAACT CGATTGGGCC
CGCGACCTCG GCGCCACTCA CGCGATCAAC GCCGCGGAAA CCGATGCGGT GGAGGCGATC
CAGGAGTTGA CCGGTGGGTT CGGCGCCGAT GTGGTGATCG ACGCCGTGGG CCGCCCCGAG
ACCTGGAAGC AGGCCTTCTA CGCGCGCGAT CTGGCCGGCA CCGTGGTTCT GGTGGGCGTG
CCGACACCGG ATATGACGCT GGACATGCCG CTCATCGACT TCTTCTCCCA CGGCGGCTCA
CTCAAGTCGT CCTGGTACGG CGACTGCCTG CCCGAGCGCG ACTTCCCGCA GCTCGTCGAC
CTGTACCAGC AGGGCCGGCT GCCGCTGGAC AAGTTCGTCA CCGAGCGGAT CTCGCTCGAC
GAGGTGGAGG CGGCGTTCGA GACCATGCAC CGCGGTGAGG TGCTGCGCTC GGTGGTCGTG
CTGTGA
 
Protein sequence
MPQVVRGVVA RAKGEPTSVV PIVIPDPGPG EVVVSVQACG VCHTDLHYRE GGINDEFPFL 
LGHEAAGVVE SVGEGVDHVA PGDFVVLNWR AVCGQCRACK RGKPQYCFDT FNATQKMTLE
DGTELSPALG IGAFAEKTLV HQGQCTRVDA TADPAVVGLL GCGVMAGLGA AVNTGGVSRG
DTVAVIGCGG VGDAAIAGAR LVGARTIIAV DRDPKKLDWA RDLGATHAIN AAETDAVEAI
QELTGGFGAD VVIDAVGRPE TWKQAFYARD LAGTVVLVGV PTPDMTLDMP LIDFFSHGGS
LKSSWYGDCL PERDFPQLVD LYQQGRLPLD KFVTERISLD EVEAAFETMH RGEVLRSVVV
L