Gene Tpau_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0402 
Symbol 
ID9154537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp422544 
End bp423686 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content71% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003645382 
Protein GI296138139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGAAG TCCTTCTGCT GTGTTGGCGA GACACCCGCC ACCCGCAGGG CGGCGGTAGC 
GAGCTGTACC TGGAACGGGT CGGCGAGGAA CTGGCCCGCC GCGGTGTGGC GGTGACCCTG
CGCACCGCGA TGTATCCCGG TGCCGCGCGC TCCGAGACCG TCGACGGGGT GCGGGTCTCC
CGCGGCGGGG GCCGCTTCAC GGTGTACCCG CTGGCCCTGC TCGCGATCGT CGCGGCCCGG
TTCGGCCGCG GCCCGCTGCG CGGCATCCGT CCCGATGCGG TGATCGACAC CCAGAACGGC
ATCCCGTTCT TCGCCCGGCT CGTGGCGGGC GTTCCCGTCA CGGTGCTGGT GCACCACTGC
CACCGTGAGC AGTGGCCCGT GGCGGGGCGC CTCGTGGCGC GGATCGGCTG GTTCATCGAA
TCGAAGCTCT CGCCGTGGGT GCACCGCCGC TCGCAGTACC TCACCGTCTC GCTGCCCTCG
GCCGAGGAAC TCGGCCTCCT CGGTGTGGGA CCGGAGCGGG TGGCCGTGGT GCGCAACGGC
ATCGACGCGC TGGAGCCCGG TGTCGCGGAT GTGCGATCTG AGACCCCGAG GATGGTGGTG
CTCTCGCGCC TCGTGCCACA CAAGCAGATC GAGGACGCCC TTTTCGTACT CGCGCGACTG
CGCCACCGCG TGCCCGACCT GCATCTGGAC GTGATCGGCA GCGGCTGGTG GGACGACGAG
CTGTACCGAC ATGCGCTGCG CCTCGGCGTG CTCGACCGGG TGACCTTCCA CGGCCACGTG
ACCGAACAGC GCAAACACCG GCTGCTCTCC CGCGCCTGGG TGCACGTGAT GCCGTCCCGC
AAGGAGGGCT GGGGTATCAC CGTGATCGAG GCCGCGCAGC ACGGTGTGCC GACGGTCGGG
TACGTCTCGT CCAAGGGCCT CACCGATTCC GTGGTCGACG GCGCGACCGG TCTGTTGGTG
CGCGATCTCG CCGGGCTCAC CGAGGCCGTG GCCGGTGTGC TCGCCGATCC GCTGCTGCGT
GCCGAGCTGG GGGAGAAGGC GCGCCAGCGT GCCGGAGAGT TCTCCTGGCA GGCCACCGCC
GACGGTGTCG GCCGGGTGCT GGCGTCGTCG GTGACGGGTG ACCGCGTGGG CGGCCTGGTC
TGA
 
Protein sequence
MREVLLLCWR DTRHPQGGGS ELYLERVGEE LARRGVAVTL RTAMYPGAAR SETVDGVRVS 
RGGGRFTVYP LALLAIVAAR FGRGPLRGIR PDAVIDTQNG IPFFARLVAG VPVTVLVHHC
HREQWPVAGR LVARIGWFIE SKLSPWVHRR SQYLTVSLPS AEELGLLGVG PERVAVVRNG
IDALEPGVAD VRSETPRMVV LSRLVPHKQI EDALFVLARL RHRVPDLHLD VIGSGWWDDE
LYRHALRLGV LDRVTFHGHV TEQRKHRLLS RAWVHVMPSR KEGWGITVIE AAQHGVPTVG
YVSSKGLTDS VVDGATGLLV RDLAGLTEAV AGVLADPLLR AELGEKARQR AGEFSWQATA
DGVGRVLASS VTGDRVGGLV