Gene Tpau_0381 details

Gene Information

• Locus tag: Tpau_0381
• ID: 9154516
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 397470
• End bp: 399572
• Gene Length: 2103 bp
• Protein Length: 700 aa
• Translation table: 11
• GC content: 64%
• Product: NADH:flavin oxidoreductase/NADH oxidase
• Protein accession: YP_003645362
• Protein GI: 296138119

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.433776
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCGACC CTCGTTATGA CATCCTGTTC GAGCCGGTTC GGATCGGACC CGTCACGGCA 
CGCAACCGTT TCTTCCAGGT GCCGCATTGC AATGGCATGG GATATCGAGA CCCGTCCGGT 
GAGGCGGCGA TGCGCCGTGT CAAAGCCGAG GGCGGGTGGG CCGTGGTGTG CACCGAACAG 
GTCGAGATCC ATCCGACATC CGACATCGGG CCTTTCATCG AACTACGCCT CTGGGACGAC 
CATGACCTAC CGGCGATCGC GCGAATCGCG GAGCAGATCC ACGAAGGTGG GGCATTGGCC 
GGAATCGAAC TGGCTCACAA CGGTCTGAAC AGCCCGAACC TGATCAGTCG GGAGACGCCG 
TTGGCGCCGC AGCACCTCCC GGTGGTCTCG TGGAATCTAG ATCCCGTGCA GGCCAGGGCG 
ATGACGAAGG CCGATATCGC TGATATGCGC CGTTGGCACG CGGATTCGGT CCGCCGATCG 
CTCCAGGCTG GCTACGACAT CGTCTACGTC TACGCCGGGC ACGCGATAGG CGGCCTACAC 
CACTTTCTGT CACGCAGATA CAACAACCGT TCCGATGAAT ACGGCGGAAG CCTGGAGAAC 
CGGGTCCGGC TGATCCGCGA GATACTGGAG GACACTCGCG AGATCGTCGA GGGGAAGGCC 
GCTGTGGCGT GCAGGATCTC GGTCGACGAG TTGCTCGGAG ACGAAGGGAT CACCCGCGCT 
GAGATGGAGG ACGTGTTCGG TCTCATCGGC GAACTCCCCG ACCTGTGGGA TCTGGTGCTC 
GGCAGCTGGG AAGATGACTC CGTCACCTCT CGATTCGGTC CAGAGGGGGA GCAGGAGCCG 
TTCGTTACCG GCCTCCGGGA CCTCACATCC AAACCAGTGG TCGGCGTGGG GCGATTCACC 
TCACCCGACA CGATGGTGCG CCATGTCACC AGCGGCATCC TCGACCTCAT CGGTGCCGCG 
CGCCCGTCGA TCGCCGATCC GTTCATGCCG AACAAGATCG AGCGGGGTGA CCTCGACGAC 
ATCCGCGAGT GCATCGGCTG CAACATCTGC GTCTCGGGCG ACTTCACCAT GTCGCCGATC 
CGCTGCACGC AGAACCCCAC CATGGGGGAA GAGTTCCGTC GCGGATGGCA CCCCGAGTCC 
ATCGCTCCCA AGCGATCGTC GTCGTCGGTC CTCGTCATCG GCGCCGGCCC CGCCGGATTA 
GAGGCGGCCC GAGCACTGGG AAATCGTGGG TACCCGGTGA CGGTGACAGA GGCGAGCCGG 
ATTCTCGGTG GCCGGGTGGT AGGGGAATCG AAACTTCCGG GCTTGTCAGC GTGGATCCGC 
GTGATCGACT ACCGCCTACA TCAGATCGCC CGACTCGACA ACGTCGAGCT CTACCGCGAG 
TCGGCGATGA ATGCCGACGA CGTCCTGGAC GTCGGATTCG ATCACGTCGT GGTGGCGACC 
GGTGCCTCGT GGCGGCGGGA TGGGGTGGGG CGCTGGCATA CTCGACCGAT CGATATCGAG 
CCCGGTGTCG ACGTTCTCAC TCCTGACGAC ATCATCGCGG GTGCGCGTCC GCAGGGCCAC 
CGAGTGGTTC TGTTCGACGA CGATCACTAC TACCTCGGCG CCGTCATCGC CGAACTCCTG 
GCCAGTGAGG GGTTCGTGGT GACCTTGGTG ACGCCGGTTC CGCAGGTCTC GCAGTGGACG 
ACGAACACGA TGGAAGCTCA TCGGATCCGC AAGCGGATCA TCGAAGCGGG AGTCGAAGTG 
CGCACCGATA CTGCGGTATC GACCGTCATG GTGGACGGCG TCGTCACGGC GTGCAGGTTC 
ACCGGTCGTA CGGGGTGGAT CGATGCGGAT TCCGTGGTTC TCGTCACCGC TCGCCTTCCG 
CACGACGATC TGTATACGGC CCTGCATGAC CGGGCGAGCG AGTGGTCGGA TGCGGGAGTT 
CAGAGTGTGC GCGGTGTTGG CGACGCATGG GCGCCCGGAA CGATCGCGGC GGCGGTGTGG 
TCCGGGCACC GGTTCGCGGA GGAGCTCGAT GCACCGCTCG GTGACGCTCC GGTGCCATTC 
CGGCGCGAGG TCACGCAACT CACGATCGAA CCCGTCTTCC CACGGCCGGC ATCTTCGTCT 
TGA 

 

Protein sequence

MRDPRYDILF EPVRIGPVTA RNRFFQVPHC NGMGYRDPSG EAAMRRVKAE GGWAVVCTEQ 
VEIHPTSDIG PFIELRLWDD HDLPAIARIA EQIHEGGALA GIELAHNGLN SPNLISRETP 
LAPQHLPVVS WNLDPVQARA MTKADIADMR RWHADSVRRS LQAGYDIVYV YAGHAIGGLH 
HFLSRRYNNR SDEYGGSLEN RVRLIREILE DTREIVEGKA AVACRISVDE LLGDEGITRA 
EMEDVFGLIG ELPDLWDLVL GSWEDDSVTS RFGPEGEQEP FVTGLRDLTS KPVVGVGRFT 
SPDTMVRHVT SGILDLIGAA RPSIADPFMP NKIERGDLDD IRECIGCNIC VSGDFTMSPI 
RCTQNPTMGE EFRRGWHPES IAPKRSSSSV LVIGAGPAGL EAARALGNRG YPVTVTEASR 
ILGGRVVGES KLPGLSAWIR VIDYRLHQIA RLDNVELYRE SAMNADDVLD VGFDHVVVAT 
GASWRRDGVG RWHTRPIDIE PGVDVLTPDD IIAGARPQGH RVVLFDDDHY YLGAVIAELL 
ASEGFVVTLV TPVPQVSQWT TNTMEAHRIR KRIIEAGVEV RTDTAVSTVM VDGVVTACRF 
TGRTGWIDAD SVVLVTARLP HDDLYTALHD RASEWSDAGV QSVRGVGDAW APGTIAAAVW 
SGHRFAEELD APLGDAPVPF RREVTQLTIE PVFPRPASSS