Gene Tpau_0373 details

Gene Information

• Locus tag: Tpau_0373
• ID: 9154508
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 390500
• End bp: 391252
• Gene Length: 753 bp
• Protein Length: 250 aa
• Translation table: 11
• GC content: 68%
• Product: major intrinsic protein
• Protein accession: YP_003645355
• Protein GI: 296138112

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.421217
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACA ACATCTCCCT GGGAGTCGTC TTCGGATCCG AGGTGGCGGG GACCGCCATG 
CTCACATTGC TCGGCTGCGG TGTGGTGGCG AACGTCCTGT TCACCCGCGG TAAAGGGTCG 
GGCGCGACGA TGACCATCGC CTGGGGCTGG GGCCTCGCCG TCTTCGCGGG CGTCTACGTG 
GCGGCGAAAT CCGGCGCGCA CCTCAATCCG GCGATCACCC TGGGCCTTCT ATCCAGAGGC 
GCAAGTGAAT ACGCCCCCGG CGTACCGGTG AGTGCGGCAT CGACCGCGGT CTACTTCTCC 
GCTCAGTTGA TCGGCGCGTT CCTCGGCGCA GTGCTGTGCT GGCTCACGTT CAAAGCGCAG 
TTCGACTCCG CCGCGGACCC CGCCGACAAG CTCGGCGTGT TCGCCACCGC CCCCGCTATC 
CGCAGCTACG GCTGGAACGC GGTGACCGAG GTCGTCGCGA CCTTCGTGCT GGTCTACGTG 
GTGCTCAACT TCGGTGGCAC ACCAACGGGA CTCGGACCGC TCGCGGTCGC CCTGGTGGTC 
GTCGGCATCG GCCTCTCCCT CGGCGGTCCC ACCGGATACG CGATCAATCC CGCGCGTGAT 
CTGGGTCCGC GCCTGGCCCA CCTGCTACTG CCGATCCCCG GCAAGGGCGG CAGCGACTGG 
AACTACTCGT GGGTGCCCAT CCTGGGACCG ATCGTCGGTG GCGTGATCGC CGGCCTGGCC 
GCACGGTGGC TGCCGTTCGC GGTCGGCGGC TGA 

 

Protein sequence

MTDNISLGVV FGSEVAGTAM LTLLGCGVVA NVLFTRGKGS GATMTIAWGW GLAVFAGVYV 
AAKSGAHLNP AITLGLLSRG ASEYAPGVPV SAASTAVYFS AQLIGAFLGA VLCWLTFKAQ 
FDSAADPADK LGVFATAPAI RSYGWNAVTE VVATFVLVYV VLNFGGTPTG LGPLAVALVV 
VGIGLSLGGP TGYAINPARD LGPRLAHLLL PIPGKGGSDW NYSWVPILGP IVGGVIAGLA 
ARWLPFAVGG