| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0351 |
|---|
| Symbol | |
|---|
| ID | 9154486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 366663 |
|---|
| End bp | 367787 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_003645333 |
|---|
| Protein GI | 296138090 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGATG TCTCGCCGGA CCACGGCCGC GAGAACCTGC GGACCCTGGT GGCCCTGTGG
TGGCGGGGTG GGCCGAGCTA CGACCAGCGG ATCGCCTACC TCCACAACCG ATCCCTGCTA
CCGATGATCC GCGTGGTGGT CAGCGTCTGC GCAGCGCTGC TCGGCCTGAT GTCCATCGCC
CTGATCCCGT TGGTACGACC GCTCACCGTC GTCGATGTGG TGCGGCTGAC GGTGTGCGGT
GCGGTGGCCC TGTTCTGGGC CGTCCGCTGG CAGCTCGGCG AGGTACCCAA TGCGCGCTGG
GCGAGCGTCT TCGTGGCGTC GTCGATCATC GCGATCTACG TGGCCTCGTC CACCCAGAAC
GAACCGCTCG CGGCGGCACT GGGCGTCGCG AGCCTGGCGA TGATCGCGAC GTTCGGCGCG
CTGATCCTCT CCACCCGCGC CTTCCTGGTG AACGCGGCAC TGATCTTCGC CGCGATCGCC
GCGTCGACTC TCCCGGTGCT GCCCGGTTAC GGCTGGGCGC AGACGCTTCT GGGGGCGGCG
ATCCTGATCG GCGCCACGAT CGGCGTGCCG GCGACGATGC AGTTCGGTAT GTCGTTCTCC
TGGTTCGACA CCGCCGAGGC CGGCACAGAC CCGCTCACCG GCGCCTTCAA TCGACGTGGC
CTGCACACCA TCTGGGCGAC ATGGGCGATG CGCCGCTCCC CCGCCGCCGA ACACGCCGCG
GTGATCGTCG TCGACCTCGA CCGGTTCAAA GCGGTCAACG ACACCCACGG TCACACCGCC
GGCGACGAGA TGCTGGTGCA GGTGGCCCGG ACACTGCGCT CGATCGGCGC GAGCGTCGAC
GCCCTGGTCG CGCGGCTCGG GGGCGATGAG TTCGCACTGC TCGTCGTAGG TCATGACGAG
GCCGAATGCA CGAATCTGGC GCATCGGATC CGTCGCGGAA TCGCCGCCGT CCCCCCGGTC
GGCGCGAGCG CCGTGACCGC GAGTATCGGA GTGGCGGTCG ACGATGCCCC GGCCACCGAT
CCCGGCCTGA TCGACCGCTT GCTGGCCGCC GCCGACGAGG CCATGTACCA GGCGAAACGA
ACCGGCGATG CGGTCGCGGT GGCCCCCGGG AACCCGGTGC TCTGA
|
|---|
| Protein sequence | MPDVSPDHGR ENLRTLVALW WRGGPSYDQR IAYLHNRSLL PMIRVVVSVC AALLGLMSIA
LIPLVRPLTV VDVVRLTVCG AVALFWAVRW QLGEVPNARW ASVFVASSII AIYVASSTQN
EPLAAALGVA SLAMIATFGA LILSTRAFLV NAALIFAAIA ASTLPVLPGY GWAQTLLGAA
ILIGATIGVP ATMQFGMSFS WFDTAEAGTD PLTGAFNRRG LHTIWATWAM RRSPAAEHAA
VIVVDLDRFK AVNDTHGHTA GDEMLVQVAR TLRSIGASVD ALVARLGGDE FALLVVGHDE
AECTNLAHRI RRGIAAVPPV GASAVTASIG VAVDDAPATD PGLIDRLLAA ADEAMYQAKR
TGDAVAVAPG NPVL
|
|---|
| |