Gene Tpau_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0345 
Symbol 
ID9154480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp358595 
End bp359365 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID 
ProductANTAR domain protein with unknown sensor 
Protein accessionYP_003645327 
Protein GI296138084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGTGC CAGCACATAA GCAGTCCACA GAACAGCTCC CCTCGGTCCT CGGCACCGTG 
CACGAGGCAC CGCCGGCGGA AGAGGTCCCG CTCGAGGAAC TGACGCTCAG CGAGCGGATG
GGCGAGATCG CGCGACTGCT GCGGGAGCAG TCCTCCGATT CGGAGTCGCT GCTGACCGCG
GTGACGCAGT TCGCGGTCGA CCAGGTGCCG GGCGCCTCGT TCGCGAGCAT CACGCTGGTC
GATCCGAAGG GCGGCATCAC CCATCCCGTC GTGATCGGGG ACGCCGCCCA GCGGGTGGCG
GATGTCCAAC GCGAGCTGGA GGAGGGGCCC AGCGTGGGCG CCACCTTCGA ATCGACCACG
ATCCTGGTCG AGGACACCGC CACCGAGCCG CGTTGGCCGC GATTCGCGGA GGCCGCCAAA
GAGGCGGGCG TGGGGTCGAT CCTGTCGTTC TGCCTGTACG TGCAGAACGA CGCGTACGGC
ACCCTCGACC TGATGGCGCG CGAGGCGAAC GCCTTCGACG CGGAATCGCA GTCGATCGGC
TCGCTGTTCG CGGTGCACGC CGCGGTCGCC TTCTCGGCGG TACGCGAGAA GGAGCAGATC
CGCGCCGCAC TCACCACGCG CGATGTGATC GGCCAGGCCA AGGGCATGAT CATGGAGCGT
TACAAGCTCG ACTCCGACGG TGCCTTCCGG CTGCTGGCCC GGCTCTCGCA GGACAGCAAC
GTGCGCTTGG CCGAGGTGGC CGAGCAGGTG ATCGAGGCGG GTCCGGACTA G
 
Protein sequence
MAVPAHKQST EQLPSVLGTV HEAPPAEEVP LEELTLSERM GEIARLLREQ SSDSESLLTA 
VTQFAVDQVP GASFASITLV DPKGGITHPV VIGDAAQRVA DVQRELEEGP SVGATFESTT
ILVEDTATEP RWPRFAEAAK EAGVGSILSF CLYVQNDAYG TLDLMAREAN AFDAESQSIG
SLFAVHAAVA FSAVREKEQI RAALTTRDVI GQAKGMIMER YKLDSDGAFR LLARLSQDSN
VRLAEVAEQV IEAGPD