Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0332 |
Symbol | |
ID | 9154467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 342002 |
End bp | 343588 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | secretion protein snm4 |
Protein accession | YP_003645314 |
Protein GI | 296138071 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTTC CGACCACCCC CGGCGCGCCC GGGGGCGCAC CGTCGCCGCA TCAGGCCGGC GCCGCACCGG GTAAGCCCGT GGTGCCCGAA CAGGTCCGGG TACTGGTCGA GGTGGGGGAG AGCTCCGTCG AGCGCAGCCT GTTGGCCCGC CGCCGCCTGT CGGTGGTGAT GGACTCGGTG ATCCCGGGGC TCGAGCAGAT CTTCCCGGAC CACGACTTCA GCACCGCCGG GGCGTGGACC TTCGCCCGGG AGGGGGGAAC GCCGCTCTCC CGTGACAAGT CGCTCGCGGA TGCCGGTGTG CTCGACGGTG ATCGGTTGAT CCTGGCGGAG ACCTTCTCGA ACCAGACGTT CCGCCCATTG ATCGAGAGCA CCGCCGACGC GATCCAGGAG TTCTGTCGCC AGCGCTTCCG CCGGTTCACC TCCGGCACCG CCCGCACCCT CGGACTGATC GCACTGGTCC TCGGTGCCGC GGTCTTCGCC GCGCTGGTGC TGCTCGCGTG GATGGCCGAT TCCAGTGTGC TGTGGTGGTT CCCGGTGGCC GCGATCGGTT CGATCGCCGT GATCACCGCG GCCGTCTCGG CAGACCGCCA GTACCACTCG CAACAGGTGG CCTACGCGCT GCAACTGGCC GCCGCGCCGG TGCTCTTCTC GACGGGGTTC GTCCTGATCC CGCCGGACGG CGGCGCCGAC GGAGCGTTCA CGGCGGCCAA CGTGCTCACG GGTGCTGTCT TCACCCTGAT CGGCGTGGTG ATCCTCGGCC GGAGCAGCGG TCTCGGCGCC GCCGTGCTCG CCGGCCTCGG ACTCGTCTCC GCCGCCACCG TCGTGGCCAG TGCGCTGTTC GCCTACACCC CGCTGGGCCG ACCGGCGATC CCCGCCATCG GCGTGATCGG CGGTCTGTTG CTGGCGAACT GGGTGCAGGG CTGGGCGCTG ATGCTGGCCC GGGTCCGCCC GGACACGCTG CCCCCGCCCG GCGAGGACAT CGACAGGTCG GAGTTGGACG TGGCGTACCA CGTCGACACC TTCGACGACG AGTCCACCAC CGAACTGGCC CGCGGCGACG AGAACACCGC GCTCGAGCGC AAGTCCCGTA CCGCGGCGAA GCTGCTCACC GGCTTCTACG TGGCGGTCGC CGCGATCCTG GTGGTCTCCG CGCTCACCAT CCTGGTGCCC GATACCCACT ACTTCTGGGG CGAGGTCGTG ATCGCCGCGC TGGTCTCGGT GATCTGTGTG CTGCGAGGTC GCACACTCGA CGACCGGGTG CACGCCACCG TCTTCTTCAT CGCGGGCTTC CTCATCGCCG CGGGGCTGGC CATCGTACTG GTCGGCGCCG TGGGATCGAA CCTGGCGCGA CTGACCGTGA TCGTGGTGAG CGCCGTGGTG CTGCTCGCCT TCGGTGCGGG CGCCCTCCTA CTGGCCGACC GCGTCTCCGC CGAGGAGGGC CTGATGGCCA AACCGCTGTC GGCACGGCTC ATGGGACGCA TCGAGTTCGG CGAGAAGACC GCCATTTTCG TGGTCGTGAT GCTCGCGCTA TGGACCACTC GCCTGTTCGC CTTCCTGCGT GAACTCGACC TGTCGTTCCT GAAGTAG
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Protein sequence | MAFPTTPGAP GGAPSPHQAG AAPGKPVVPE QVRVLVEVGE SSVERSLLAR RRLSVVMDSV IPGLEQIFPD HDFSTAGAWT FAREGGTPLS RDKSLADAGV LDGDRLILAE TFSNQTFRPL IESTADAIQE FCRQRFRRFT SGTARTLGLI ALVLGAAVFA ALVLLAWMAD SSVLWWFPVA AIGSIAVITA AVSADRQYHS QQVAYALQLA AAPVLFSTGF VLIPPDGGAD GAFTAANVLT GAVFTLIGVV ILGRSSGLGA AVLAGLGLVS AATVVASALF AYTPLGRPAI PAIGVIGGLL LANWVQGWAL MLARVRPDTL PPPGEDIDRS ELDVAYHVDT FDDESTTELA RGDENTALER KSRTAAKLLT GFYVAVAAIL VVSALTILVP DTHYFWGEVV IAALVSVICV LRGRTLDDRV HATVFFIAGF LIAAGLAIVL VGAVGSNLAR LTVIVVSAVV LLAFGAGALL LADRVSAEEG LMAKPLSARL MGRIEFGEKT AIFVVVMLAL WTTRLFAFLR ELDLSFLK
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