Gene Tpau_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0270 
Symbol 
ID9154405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp278376 
End bp279470 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content63% 
IMG OID 
ProductN-acetylmuramoyl-L-alanine amidase family 2 
Protein accessionYP_003645258 
Protein GI296138015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.185404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATTT CGCGGAGTGT TTCGCGACGA ACTGCGTTGA TAGCGGGAGC TACCTTTACC 
GCTGCGATCG CCGGTGGCGG GCAACGTGCT GTCGGGGCAC CAGTGCCGAC GCAGCTAGGC
CCGGCCGGAT ACGTGTCGGT TGACCTCACC GGAACACAAG GGCAACGAGT AGCCCTCAGG
ATCGGTCTTC CCGGAGGCAA AAGCGTCGAG ATCGCTGTCC GTCGAACCAC ACACGGACGA
GATGACAGGC CACTACCGAA CACGTCGGAA CTGATCGCGC TTCCTCCGGA CACAATCGAC
CTGGAAGTCA TCACCGACGC CGGCATATCG ATCTCGCCGA CCCGCTACCG GATCGCAACC
GCACCCAACT TCCAGGCACC GGTCGCTACG CACTACGGCT GGGGATTTCC CGTGGTGACC
AGATCAGGTT GGGGAGCAGA CCCAGCCCTG CAAACATGGG GGGAACCGGA ATACACCCCC
GCCCAATTGA TCACGGTGCA TCACACAGCA CAGCCTCGCG GCGATGAATT CATCGACTAC
CGCGATGCGA TCCGCTCGAT CTACCGATTC CATGCCCTTC CGGAGGCAGA GGGCGGCCGA
GGCTGGGGCG ACATCGGCTA CCACCTCATC ATCGACCCCA ACGGAGTCAT CTACGCCGGA
CGCGACACCG GTACCGAAGC ACCCATCTTC ACCCCCGGCA CGACGTCCCT GAAACCGCGA
ACATCCGTCG TCACTGCCGG ACACGTATAC CAAGCCAACA GCGGCAACAT CGGTATTTGC
GTCATCGGAG ACTTCACCGG CTCACAACCG ACCCCGGCCG CCCGCGCCGC GCTCACACAG
GTCCTCAGCG CACTCTGTCA ACAGCTTCAA CTAAACCCGC AAGCCGCGGT GCAATACGCA
AATCCTAACA ACGCCGTTCG AGCCACTCAG TGGGCGGTCA GCGGCCACCG CGACTGGAGC
AAGATCGCCG GCCCCACAGA GTGCCCCGGC GACGAACTGT GGGCCCTCCT ACCTGCCTTA
CGTTCAGCGA CCGAACTGAA AATCGCCGAC GAAAACAGGG TCCCTCGAAC CGCACCCTCG
GCCCCGGTCT CGTAG
 
Protein sequence
MGISRSVSRR TALIAGATFT AAIAGGGQRA VGAPVPTQLG PAGYVSVDLT GTQGQRVALR 
IGLPGGKSVE IAVRRTTHGR DDRPLPNTSE LIALPPDTID LEVITDAGIS ISPTRYRIAT
APNFQAPVAT HYGWGFPVVT RSGWGADPAL QTWGEPEYTP AQLITVHHTA QPRGDEFIDY
RDAIRSIYRF HALPEAEGGR GWGDIGYHLI IDPNGVIYAG RDTGTEAPIF TPGTTSLKPR
TSVVTAGHVY QANSGNIGIC VIGDFTGSQP TPAARAALTQ VLSALCQQLQ LNPQAAVQYA
NPNNAVRATQ WAVSGHRDWS KIAGPTECPG DELWALLPAL RSATELKIAD ENRVPRTAPS
APVS