| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0267 |
|---|
| Symbol | |
|---|
| ID | 9154402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 275927 |
|---|
| End bp | 277090 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | transposase IS3/IS911 family protein |
|---|
| Protein accession | YP_003645256 |
|---|
| Protein GI | 296138013 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.118178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAG CACCGGCCGT CGGGCAAGAG CCGATCATTG TCGGCATTGA CACCCACAAA
GAGACACACC ACGCTGCGAT CCTGAGCGCG CGAGGAAAAT TCCTCGCCGA CAGGAAGTTT
CCAGCCACGG CTCTCGGATA CTCGCAGCTG CTGACCTGGA CTGCGACTGT CGGCACGGTG
GCTGCATTCG GTATCGAGTG CACCGGCTCC TACGGCGCCG GCCTCCTTCG TCACCTTCTG
GCGGAGGGCC ACGATGTGCG TGAGGTCAAC CGCCCGCACG CGCATACCGC TGCTCGGCGC
GGTAAGACTG ATGCGATCGA CGCCGAGGCC GCGGCGCGTA AGGTTCTAGC CGGTGAGGCG
CCTGTGGTGC CGAAGGACAC CACAGGTGCG GTGGAGTCGA TCCGGATGCT CACCTTGGCC
AGAAATTCCG CGGTTAAGGC CCGATCGACT GCGCAGACCC AGTTGCAGAA CGTGCTCATC
ACCGCTCCGC ACACGCTGCG CGAGCAGATC AACAGCGATG TCTCCGGACC GAAGGCTCGC
GTCGCGGCAT GTAGTCGTCT GCGTCCTAAT ATTTCGAGGC TCAACGAGCC GGCTCAGGCC
GCGAAACTGA CCTTGCGCAG CCTCGCGCAG CGTGTGGAGA GCCTGGACGA CGAGATCGCT
ACTCTTGACC GCGAACTTGG GCAGCTCGTC GCCGCGACCA CTCCCACGCT GGTCTCCAAG
CTCGGAATCG GCACCGGGCA CGCGGCACAG TTCCTCATCA GTGCAGGGGG CCTTACCCCC
TGTTCTTGGA CACGTGTAAT CCAGCACATG GCTGGGGGAA GTGAGAATCC AAGGATGGCC
AGGAAGAGTT ACACCGATGA GTTCCGGTGC CGGGCGGTGG ACTTGTATGA GTCGACGCCG
GGTGCGACGT TGCAGGGGAT CGCGGCGGAT TTGGGTGTGT CCCGGGGATC GTTGAAGGGG
TGGGTCGACA AGCTCGGCTC CGGGACGAGG ACCGCGTCGG CTGCGGCGGG GGTGTCAGTG
GGGCGGCGGG AGTCGCAGGC GGCGAGGATC ACGAGGCTGG AGGCCGAGAA TGGGGTGTTG
CGGGTCGAGC AGGCAAAGCT TGCTGAGGAA CGCGACATTC TCCGTCAGGC GGCGAAGTAT
TTCGCCGGGG AGACGAGTTG GTGA
|
|---|
| Protein sequence | MTAAPAVGQE PIIVGIDTHK ETHHAAILSA RGKFLADRKF PATALGYSQL LTWTATVGTV
AAFGIECTGS YGAGLLRHLL AEGHDVREVN RPHAHTAARR GKTDAIDAEA AARKVLAGEA
PVVPKDTTGA VESIRMLTLA RNSAVKARST AQTQLQNVLI TAPHTLREQI NSDVSGPKAR
VAACSRLRPN ISRLNEPAQA AKLTLRSLAQ RVESLDDEIA TLDRELGQLV AATTPTLVSK
LGIGTGHAAQ FLISAGGLTP CSWTRVIQHM AGGSENPRMA RKSYTDEFRC RAVDLYESTP
GATLQGIAAD LGVSRGSLKG WVDKLGSGTR TASAAAGVSV GRRESQAARI TRLEAENGVL
RVEQAKLAEE RDILRQAAKY FAGETSW
|
|---|
| |