Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0245 |
Symbol | |
ID | 9154380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 255666 |
End bp | 256460 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003645234 |
Protein GI | 296137991 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.197682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCACCAA AGCTGGAGCA CATCGAGCGC TGGCTGCTTC TGAAGTCCGT GACCTACCAA GTCTCCCCCA ATGTGCAATC AAGTGGTGCT GCCGTATTGC AGATCTGCGG GTTGACCTAC GCTGCCGGCC ATCCGTCGTC AACGATCGTC AAGGACGTGA ACCTTACTGT CAGGGCAGGG GAGTCAGTTG CGGTCATGGG CCGGTCTGGC TCCGGCAAGA GTTCGCTGCT CAAGCTTGGT GGTGGGCTCC TGCAGCCGAC GGCGGGATCG GTTTCTGTGG CTGGCACCCG CATAGACGAC CTAGGGGAGA AGGGGCGGGC ACTGGTCCGC CGTGGACCCG TGGGTTTCAT ATTCCAGGGC TTGAACCTTA TCGAGAATCT CAGTGTCGCC GACAATCTCG ATGTTGCCGG GCGCATCCGC GGGCGGCGCT ACACGTCCGC CGAGAAGACC GCTGCGCTAG AGACGGTAGG ACTGGCGGCG ATGGGGTCGC GTCTGGTCGA AGACCTTTCG GGCGGCGAGG CGCAGCGTGT CGCCATCGCC CGCTCCTTGA TGAGCAAGCC CACGATAGTG TTCGCGGACG AGCCGACGGG TGCACTGGAT TCGACGAACG CAGCGAATGT CACCTCACTG TTTAAGGACG TTGTTGCAGC CGGCAGTGCG ATGGTTGTAG CTACCCACGA TCCCATCGTT GCTGCGAACA CCAGCCGGGT GGTCTTTCTC TCCGACGGCA GGATCGTTGG AGAGTTGTCC TCGCCCTCCG CGGAGGAGAT CGCCCGGCGT GTTATCGCCC TGTAG
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Protein sequence | MPPKLEHIER WLLLKSVTYQ VSPNVQSSGA AVLQICGLTY AAGHPSSTIV KDVNLTVRAG ESVAVMGRSG SGKSSLLKLG GGLLQPTAGS VSVAGTRIDD LGEKGRALVR RGPVGFIFQG LNLIENLSVA DNLDVAGRIR GRRYTSAEKT AALETVGLAA MGSRLVEDLS GGEAQRVAIA RSLMSKPTIV FADEPTGALD STNAANVTSL FKDVVAAGSA MVVATHDPIV AANTSRVVFL SDGRIVGELS SPSAEEIARR VIAL
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