Gene Tpau_0235 details

Gene Information

• Locus tag: Tpau_0235
• ID: 9154369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 246684
• End bp: 248798
• Gene Length: 2115 bp
• Protein Length: 704 aa
• Translation table: 11
• GC content: 61%
• Product: hypothetical protein
• Protein accession: YP_003645224
• Protein GI: 296137981

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0280045
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGAAGT TCGACTACTC CGTGCCTGCT CCGGCAAAGG GCGAGTATGC GTTTTCGTTG 
TTTGGGCTTT TCTCGATCAA CCCGTTCAGC GGTAACACTT CGGTGCTCGG GATCAAGTTC 
AACCTGTGGG ATACCGTCGG GAACATCGCA GGTGGCGTGG GTAAAGCGAT CGACGGCGTG 
GGTAAGGCCA TCGATGGGAT TGTGAGCCCG AAGCCGAAAG ATGATGGAAA GCCTGCTATT 
CCCGGCACGA CACCGCAGCC ATTTGCGCAG GTTGTTGTTG GTGCGGCCGC GTTCATTTTG 
CTGTTTGGGG CGATCTACTT CGCAACGCTT CCCCCGCAGC AGCGGCAGGA CTTGATCCGT 
CGTGGCACCG AGCCTCTTAA CCAGTGGTGG AACAACGCGC GCGACCGTAT CCACGACCTG 
CTGAATCCGG CGGAACCTGA GGCGAAAACC CCTACCATCG GCGGCGAGGT CAAGCCCCCC 
GCGCAGGGCG CCACCGAGCC TCCGCACACA ACGCCGAATC CGGTACCGAG CAACCCGGTC 
TCGCCTGTAA CCCCGGACCT TCCTGCGGCC CCGTTTACCA CCCCCGGTGG GAATGGCACC 
GGGGCCGGCA CTGTTGGCAC TCCCACCCGC CCCGGCACGC AGATACCGGC CGTGCCTGCC 
GGCAATCCTG GTATCAGCAC ACCCGCCCCC GGCGGTGGCC AGGACGACCC CAACAACGAC 
GACGATGACG GTCCGGACAA GAACCCGGAC AAGGACACCG ACCACCAGAG CTACCCCGCT 
GGCGGCATCA TCGGCGCCGG CCTCGGCGGA GCAAGCATCG AAACCCCCGG CCTGCCCACC 
ACCCCGGGAA CGAACCCGCC CGAACCCAAC AACGGCACCC CGGGAACAAC GACGCCGCTC 
GACCCTGACC ATCACCTCGA CCCGAACAAG CCGGACAAAG CCACACCAGT CGAGATCAAA 
CCGGAGCCGA CCGCCCCGAA GAACCCGATC CTCGGCCTCG CCGAAAACAT CCTCGGATTC 
TTCTTCCCCA AGCCCAAACC TGCTATTCCC GAACCCTCCA CCCCGGAGCA TCCCGGCGGC 
ACCACCACCG GAACCGGCAC CAACAACAAC AGCAGCAAGG GTGACGGCGG CGATAGCGGT 
GATGGTGGCG GTGACAGCGC CGCCAACTCT GGCAACACCG GCGCTACGAC CCCCAGCACC 
CCTGCTACAA GCAACGGAGA GGGGCCAGGC AGCAACGGCT CGTCGAGCAC CCACGAGCCC 
CCTGCCAGCA CCCCCACGGC TGGATACCCG GTCGACACCC TCGCCAAGCT CGCCACGTCC 
GAGGTGTACG GCCCGGAACT CGAAGCCGTA GTCGCAGCGC TACAAAAAGA AGCAACAGGC 
CCAACGGTCA GCGATGTTCA AGCTGCGCAG AAACGCCTCA TCGAACAAGG GAATCAAGCG 
CCCGCTGTAG ATGCAATGGT CAACATTGTC GCTTCCATGC TCGCCGCCCG GGACAAGCAG 
GAACTTGCCG CCGCTCAACA GCACCTCGAA GACATCGCAG CAAAACTCGG CGTACCCGTC 
GCAAACCTTC CCAAAACCGA CGACATGTAC CTATTCCCCA TGTCAGCCGC GCCCACCAAC 
CCCACACACT CACCCTACGA ACGCATCCGA GAACTCCTCA CCCAAATCAC ATGGCACAAC 
AGCCAAACCG TTCAAGAGGC ATACGACCAA GCAAAGAACC GAACGTACTC CAGTGCTGAA 
GCTGAGCAAG CAAGAAAGGA CTTCCGTGAT CAGCTGCGAA CGAGCGGATA TGAAGCTCTC 
CTAGAGATGG GATATCGGCC AGATGCCGCA GATTCGCTAT CGAAATCAAT CGCTGAACAG 
TTGATGAAGA AGTTGGTGGT TACCCATAAT CCGGATAGGA TTGTTGGCGG GCGGTCTGAT 
AAGATGGTGA CGTTCGGTGA TTCGCGGACG AACAGCTCGA TCGGGAACGC TAACCAGCGT 
GGGGCGGCGG CGTATCTAGC CTGGCTGGAA GTGCAAATGA AGAAAAATCC CGACGCGATC 
GTCCGATTCG ACTTCGTTGA ACCCGACGAT CCGGAGACTC CCTCAACTAC ACCACCCGGC 
GGTACTGATG ACTGA 

 

Protein sequence

MPKFDYSVPA PAKGEYAFSL FGLFSINPFS GNTSVLGIKF NLWDTVGNIA GGVGKAIDGV 
GKAIDGIVSP KPKDDGKPAI PGTTPQPFAQ VVVGAAAFIL LFGAIYFATL PPQQRQDLIR 
RGTEPLNQWW NNARDRIHDL LNPAEPEAKT PTIGGEVKPP AQGATEPPHT TPNPVPSNPV 
SPVTPDLPAA PFTTPGGNGT GAGTVGTPTR PGTQIPAVPA GNPGISTPAP GGGQDDPNND 
DDDGPDKNPD KDTDHQSYPA GGIIGAGLGG ASIETPGLPT TPGTNPPEPN NGTPGTTTPL 
DPDHHLDPNK PDKATPVEIK PEPTAPKNPI LGLAENILGF FFPKPKPAIP EPSTPEHPGG 
TTTGTGTNNN SSKGDGGDSG DGGGDSAANS GNTGATTPST PATSNGEGPG SNGSSSTHEP 
PASTPTAGYP VDTLAKLATS EVYGPELEAV VAALQKEATG PTVSDVQAAQ KRLIEQGNQA 
PAVDAMVNIV ASMLAARDKQ ELAAAQQHLE DIAAKLGVPV ANLPKTDDMY LFPMSAAPTN 
PTHSPYERIR ELLTQITWHN SQTVQEAYDQ AKNRTYSSAE AEQARKDFRD QLRTSGYEAL 
LEMGYRPDAA DSLSKSIAEQ LMKKLVVTHN PDRIVGGRSD KMVTFGDSRT NSSIGNANQR 
GAAAYLAWLE VQMKKNPDAI VRFDFVEPDD PETPSTTPPG GTDD