Gene Tpau_0225 details

Gene Information

• Locus tag: Tpau_0225
• ID: 9154359
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 239949
• End bp: 240716
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 61%
• Product: Abortive infection protein
• Protein accession: YP_003645218
• Protein GI: 296137975

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCTG ACCTTCTTGT GCGCGCTCGG GCCTTCTTCG CAAACCAACC GGCTGATGCT 
TCCTGTCTCC TCGTGCTCAT CCGAGTGATC TGGGTTTCCG CTTCGATTGT CGCGCTGATG 
GCACCGGAAG AACTTTACGA ACAAGACCTC TCGCGGGGAG TCGTGCTCGC GGCTGTCGCC 
GCGACCGTCG GCATAGTTGT CGTAGTTGGT GGGCATTGGC TTACTCAGTC ATCGCTTCTC 
CCCTCCTCCC GCTGGCTAGG ATTTGCTTTA CCCCGCCGGT GGTGGCTGTG GCTCCCCGTA 
GGCGCAGCCG CTGGCTTCGG CCTCTCGCGA GGTCTAACTG CACTGCATCT TCCCCAGCTC 
TGGCCTGCAC TGACCGATTC GACCGCGCAA CAACTGGCGA ACAACGAACA GCGAGAAGCT 
GAGGCGTTCA CCTGGACTGA CTGGACACAC GCAGCAGGCG AGGAAGTGAT CTTTCGCATG 
CCCGTGGTCG CCGCGGCGTG TTTCGCGCTC GGCTTTACTG GAGCCCGGAT GCCCGATGCG 
TCTCGGGCCC GTCTCAGCAT CCTGGCTGGC GTGGTGATTG CTACGGCGCT CTTGTTCGGT 
CTGATTCATC TTGACTACGG CTGGTACAAC GTCGTTACCA CCTGGGTGTT AGGCGCAGGG 
TGCGCAGCGA TCGCGATCGC CTCCCGATCG GTCTGGCCAG CAGCGACGTT GCACGCGGCC 
TACAACACCG CCAACCACTT CCCAGACATC GTGTGGAGTC TTTGGTGA 

 

Protein sequence

MNADLLVRAR AFFANQPADA SCLLVLIRVI WVSASIVALM APEELYEQDL SRGVVLAAVA 
ATVGIVVVVG GHWLTQSSLL PSSRWLGFAL PRRWWLWLPV GAAAGFGLSR GLTALHLPQL 
WPALTDSTAQ QLANNEQREA EAFTWTDWTH AAGEEVIFRM PVVAAACFAL GFTGARMPDA 
SRARLSILAG VVIATALLFG LIHLDYGWYN VVTTWVLGAG CAAIAIASRS VWPAATLHAA 
YNTANHFPDI VWSLW