| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0218 |
|---|
| Symbol | |
|---|
| ID | 9154352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 232538 |
|---|
| End bp | 233836 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_003645211 |
|---|
| Protein GI | 296137968 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.42624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCG TTGATATCCC CGCCAATTCC GCTACCCCGA CCCGTACCGC TCAGGCCCGG
GCCGCACGCG CCCGCAACCC GCTGACCAGG CCCGCGGTCG AGCGCGCCCC GCGAGTCGCG
GCACCGGCCC GCGTCTTCCC GCCCCAGTTG CGGGTATCCG AGAAGCCCGC AGCCGCCGTC
CTCCGGGTGA TCCGGCGTGG GGGGCTGGTG CTGCGCGACG AGATCGTCCG CGAGACCCAG
CTCTCCGCTG CCACCGTGAA CCGCCAGGTC ACGGCTCTCA TTGAGGCGGG TCTCGTTCGC
GAGCGCGCCG ATCGAGCGGC CAGCGGTGTC GTCGGTCGGC CCCGTCTGCC GCTCGAGGTG
GACCCGACCG GTCCGCTCGC GCTCGGCATT CACATCGGCT TCCGAGTGAG CACGGTGACC
ATGCACGACG TGTCCGGCAA GATCGTCGGC GCGATCCAGA TCCCGACACC CGAGAGCGGC
GAGCCGGGCG AGGTGCTCTC CGTGATCGCC ACCAGCGCGC GACGGTTCCT GGCCCGCTGG
GACGGCCGCA CCATCCTGGG GGCCGGTATC GCGATCGGTG GGCGCGTGGA CGATCGGGGT
GTGGTCGCCG ATCATCCACG CCTCGGGTGG AAGGACGTTG CTCTCGGTGA GCGCCTGTCC
GGAGCGATCG GCCTGCCCGT GACGGTGGCG CCGCACGTCG AGGCGATGGC CGCCGCCGAG
CTGCACCTGT CGGAGTCGTT GGAGTCGCAG GGCTCCACCC TGTACTTCTA CGGTCGGGAG
ACCGTCGGCG TCGCGCTCGC CTTGCACGGT GCGGTGCATT CACCCAAGTC GGGCCCGCAC
ACCATCGGTC ATCTGCCCAC CCGCAATGTC ACGCTGCTCG ACCCGCGTGG CACCGGGCGG
CTCGAAGACG CGGTGACGGA CACTGCGGTG GTCGAGGCGG CGCAGGTGCA GAAGCTGGCC
GTGCGCACCG TCGCCGACCT GCACAAGTTG GCCGAGGGTG GCAATGCGAC CGCGAAGGCG
ATCATCGCGG AGCGCGGCCG GGTGCTGGGC GAGGCGGCCG CGTTGGTGGC CGACATCTTC
AACCCCGACC GGCTGATCCT CGGCGGACAG GCGTTCACCG ACTACCCGGC GATCCTGCCG
CATGTGTCCG CTGCGCTGAA GGCGACGTCG GCTGAACCCA GCCGCGCCGT CCGGGTCAGT
GGTGCCGGGG GTCGCGTGCA GCAGCAGGCC GCCGGTGCGG CTGCGCTCGA CGGCGTATAC
GCCGATCCAC TGGGCGCCAT CGCCCGCGCC ACCGCCTGA
|
|---|
| Protein sequence | MTVVDIPANS ATPTRTAQAR AARARNPLTR PAVERAPRVA APARVFPPQL RVSEKPAAAV
LRVIRRGGLV LRDEIVRETQ LSAATVNRQV TALIEAGLVR ERADRAASGV VGRPRLPLEV
DPTGPLALGI HIGFRVSTVT MHDVSGKIVG AIQIPTPESG EPGEVLSVIA TSARRFLARW
DGRTILGAGI AIGGRVDDRG VVADHPRLGW KDVALGERLS GAIGLPVTVA PHVEAMAAAE
LHLSESLESQ GSTLYFYGRE TVGVALALHG AVHSPKSGPH TIGHLPTRNV TLLDPRGTGR
LEDAVTDTAV VEAAQVQKLA VRTVADLHKL AEGGNATAKA IIAERGRVLG EAAALVADIF
NPDRLILGGQ AFTDYPAILP HVSAALKATS AEPSRAVRVS GAGGRVQQQA AGAAALDGVY
ADPLGAIARA TA
|
|---|
| |