| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0196 |
|---|
| Symbol | |
|---|
| ID | 9154330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 209019 |
|---|
| End bp | 210491 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | phosphoesterase PA-phosphatase related protein |
|---|
| Protein accession | YP_003645189 |
|---|
| Protein GI | 296137946 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAT CAGCGATCCG GAGCCTGCGG CGTGGGTTCA GTGAGCTCGA CGGGAAGCTC
TTCGACGCCG TCGCCGATTC GTCGAGCCCA CTGCTGGACC ACACGATGCG CCCACTGTCG
GCGGCAGCGG ATCACTCGGT GCTGTGGATG GCGATCGCCG CTGGGATGAG CACGGGCGGA
CTGTCATTGC GCCGGGGAGC CGTACGCGGC CTGGCCAGTC TCGCGGTGAC GAGCCTCGTG
GTGAATCAGG GGCTCAAGCG CATCTACCCG CGGGCCCGGC CCGCTTTCGC GGGGGTACCG
GTCAAAAGGG CGCGCCGCCA GCCCACGTCG AACTCCTTCC CGTCGGGACA CGCCGCGAGC
GCGGCCGCCT TCGCTGTCGG GGTCGGCCTG GAGAATCACT CGGCAGGTTA CCTGCTCGGT
GCTCTCGCGG CCGCTGTGGG ACTGTCGCGA GTGGCCACCG GTGCTCACTA CCCCGCGGAT
GTGCTCGCGG GGTTCGCCGT CGGCGCAGGG ATCGCCGCCG CCGGGGCGCG GTTGGTGCCG
CCTGTCGACG AAGGATGCTC GACCACACCC GCGCCCACCG TCGAGCAGGT GCGGCCGGCT
CCCGACGGGG CCGGACTGGT GGTGATCCTC AATCCGTCGT CCGGAGACGG TACCGGCAGG
CGGGTGGCGA ACGAGCTGCG GGCCGCGCTG CCCGGCGCCG AGATCGTGGA ATTGGAGCCG
GGGGCCGATG TCGCCGCGAT CGCCGCCGAG GCCGCGAGCC GGGCGGAGTT CCTGGGGGTC
GCCGGTGGCG ACGGGACGGT CGCCACCGTG GCCGCGCAGG CGGTGGCGGC CGATACGCCG
CTCGCGGTCT TCCCGGCCGG CACCTTCAAC CACTTCGCCA AAGACATCGG TTCCGATACT
GTTTCCGCGG CAGTGGATTT CCTCCGTCGG GGAATGGTCA CGCGGGTCGA CGTGGTGTGG
CTCAATGAGG AGAAGATGCT GCTCAATACC GCGAGTATCG GCGCCTATCC CGAGTTCGTG
CGCACCCGGT CCCGGTTGCA GCGTCGCCGT ATCGGCAGGC CCTCCGCAAC CGTGCGCGCG
ATCTTGAAGG TGCTGCGCAA CAGCGCGCCG GTGCGGGTGC GTATCGGTGG CCGGCCGGTC
ACCGTCTCGT TCTTCTTCCT CGGCAACTCC CAGTACGGTG CAGCGGGTTT CGTCCCCGGC
CGGCGCAGCC GCCTCGACGA CGGAATGCTC GACGTGCGCT ATCTGGAGGA CGGTCACCGC
AATGCGGCCG CCCGTCTTCT GCTGTCCTGG CTCAGTGGCC GGATCACCAC CTCGAAGATC
TATCGCGAGG TGCAGGCGCC GGAGGTCACG ATCGAGGCCG ATCGGCCCTT CCGTGTGGCG
CACGACGGAG AGGCGGGCGA CCTGCACACC CGGGCCCACT TCCGCGTCGG CCATCGCGCG
CTGCGCGTCT TCGGCCGGAG CGAGGTCGGC TAG
|
|---|
| Protein sequence | MAESAIRSLR RGFSELDGKL FDAVADSSSP LLDHTMRPLS AAADHSVLWM AIAAGMSTGG
LSLRRGAVRG LASLAVTSLV VNQGLKRIYP RARPAFAGVP VKRARRQPTS NSFPSGHAAS
AAAFAVGVGL ENHSAGYLLG ALAAAVGLSR VATGAHYPAD VLAGFAVGAG IAAAGARLVP
PVDEGCSTTP APTVEQVRPA PDGAGLVVIL NPSSGDGTGR RVANELRAAL PGAEIVELEP
GADVAAIAAE AASRAEFLGV AGGDGTVATV AAQAVAADTP LAVFPAGTFN HFAKDIGSDT
VSAAVDFLRR GMVTRVDVVW LNEEKMLLNT ASIGAYPEFV RTRSRLQRRR IGRPSATVRA
ILKVLRNSAP VRVRIGGRPV TVSFFFLGNS QYGAAGFVPG RRSRLDDGML DVRYLEDGHR
NAAARLLLSW LSGRITTSKI YREVQAPEVT IEADRPFRVA HDGEAGDLHT RAHFRVGHRA
LRVFGRSEVG
|
|---|
| |