Gene Tpau_0186 details

Gene Information

• Locus tag: Tpau_0186
• ID: 9154320
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 198942
• End bp: 200963
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 70%
• Product: PTS system, fructose subfamily, IIC subunit
• Protein accession: YP_003645179
• Protein GI: 296137936

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGAAC CGATCATCAC GCCCGAACTG GTGGCGCTCG ATATCGCGGC CGGAACCGAG 
AAGTCGGAGG TGATCGGCTA TCTCGCGCAC CGCATCGCCG AGGCCGGCCG TGCCCACGCG 
GTCGATGCGC TGATCGAGGC GGCCCTGGCC CGTGAGGGCC AGTCCGCCAC CGGACTGCCC 
GGCGGCATCG CGATCCCGCA CTGCCGTACC GCGTCCGTGA CCGCAGCGAG CCTGGCCTTC 
GCTCGGCTCG ATCCGCGGGT CGACTTCGGT GCGCCCGACG GTCCGGCCGA TCTGGTGTTC 
CTCATCGCAG CGAGGGAATC CGGTGGCTCC CAGCACATGA AACTGCTCAG CGCCCTGGCC 
CGCGCGCTGG TGCGCCCCGA GTTCGTGGCC TCCCTCCGCA CCGCGAGTAC GCCCGAGGAG 
GTGGTCGCGC TCGTCGACGA GGTGATCACA CCCGCATCGC CCGCGCCGAA GCCCGCTCCC 
GCCGATCCTC CTGCCGCTCC TCCCGCCAAG AGGCCTGCGG TGATCGCGAT CACCGCGTGT 
CCCACCGGGA TCGCACACAC CTACATGGCC GCCGATGCCC TGAAACTCGC CGCCGAGCGC 
GCCGGCGTCG ACCTGACCGT CGAGACGCAG GGCTCCTCCG GATCCAGCCC GCTCTCGGCG 
CAGACCATCG CCGAGGCCGG CGCCGTCATC TTCGCCACGG ATGTGGGCGT CAAGGGACGC 
GAGCGGTTCG CGGGCAAACC CGTCGTCACT TCGGGTGTCA AGCGCGGCAT CAACGAACCC 
GATGCGATGA TCGCGGAAGC GGTGGCCGCC GCGTCGGATC CGCGGGCCGC CATCGTCGAC 
GGCGATGCAG CCACGACCGC GGAATCGGCA CCCGCACACG CGGGCCTCGG CGGAGAGCTC 
AAGCGCGCCT TGCTCACCGG CGTCAGCTAT ATGATCCCGT TCGTCGCTGC CGGAGGCCTG 
CTGATGGCCC TGGGCTTCCT CATGGCGGGC TACGAGATCG GTAGCGAACA CGGATCCGAC 
GGTGTGTCCA ACGGCGCCTA CTTCGCGCTC CACAATTCGC TGTGGAACCT GCCCGACGGC 
GGAATGCTGC AGTATCTCGG CGGCGTGAGC TTCGCGATCG GTCAGGCCGC GATGACGCTG 
ATGGTCCCGG TGCTCGCCGG TTACATCGCC TATGCGATCG CCGACCGTCC CGGTCTGGCA 
CCGGGATTCG TCGCGGGCGT GCTCGCCGGC ACCGTGGGCG CCGGTTTCAT CGGCGGTGTG 
GTCGGCGGCC TGCTCGCCGG TGTGGTCGCG CTCTGGCTCA GCCGGATCCC GTTGCCGCAA 
TGGGCCCGCG GCCTGCAGCC GGTGGTGATC ATCCCGCTCC TCGGCACACT GATCACGGGC 
GGCCTGATGT ACATGGTGCT GGCCGGCCCG TTGCGTTGGG TGAACGAATC GATGACCAGC 
GCCCTCAACG GCATGAGCGG CAGCAGCAAG ATCGCGCTCG GCGCGGTCCT CGGCCTGATG 
ATGTGCTTCG ACCTGGGCGG ACCGGTGAAC AAGGCCGCGT ACGCCTTCGG CGTCGCCGGA 
ATCGGTCTCA GCACGGCGGG GGTGCCGCAG TGGGAGATCA TGGCCGCGGT GATGGCCGCG 
GGTATGGTGC CGCCGCTCGC GTTGGCGCTG GCCACCTTCG TGCGCCCGGG GCTGTTCACC 
GAGCCCGAGC GCGAGAACGG CAAGGCGGCC TTGCCGCTCG GCCTGTGTTT CATCTCCGAG 
GGCGCCATCC CGTTCGCCGC GGCCGACCCG CTCCGAGTGA TCCCGACCAT GATGCTCGGT 
GGTGCCGTGA CCGGTGGGCT GTCGATGGCC CTCAGCGCGC AGCTGCGCGC CCCGCACGGC 
GGCGTCTTCG TGATGTTCGC GACCAACGGC ACGTGGTGGA AGTTCCTCGT CGCGCTCGCG 
GTCGGCGTGA TCGTCAGCGC TGCCGCCGTC GTGACCGCCA AGGCGGTGTG GCGTCGCGAC 
GCTCCGGTCG AATCGCCGCA GCCCGCAGCC GTCGCCGCGT AA 

 

Protein sequence

MTEPIITPEL VALDIAAGTE KSEVIGYLAH RIAEAGRAHA VDALIEAALA REGQSATGLP 
GGIAIPHCRT ASVTAASLAF ARLDPRVDFG APDGPADLVF LIAARESGGS QHMKLLSALA 
RALVRPEFVA SLRTASTPEE VVALVDEVIT PASPAPKPAP ADPPAAPPAK RPAVIAITAC 
PTGIAHTYMA ADALKLAAER AGVDLTVETQ GSSGSSPLSA QTIAEAGAVI FATDVGVKGR 
ERFAGKPVVT SGVKRGINEP DAMIAEAVAA ASDPRAAIVD GDAATTAESA PAHAGLGGEL 
KRALLTGVSY MIPFVAAGGL LMALGFLMAG YEIGSEHGSD GVSNGAYFAL HNSLWNLPDG 
GMLQYLGGVS FAIGQAAMTL MVPVLAGYIA YAIADRPGLA PGFVAGVLAG TVGAGFIGGV 
VGGLLAGVVA LWLSRIPLPQ WARGLQPVVI IPLLGTLITG GLMYMVLAGP LRWVNESMTS 
ALNGMSGSSK IALGAVLGLM MCFDLGGPVN KAAYAFGVAG IGLSTAGVPQ WEIMAAVMAA 
GMVPPLALAL ATFVRPGLFT EPERENGKAA LPLGLCFISE GAIPFAAADP LRVIPTMMLG 
GAVTGGLSMA LSAQLRAPHG GVFVMFATNG TWWKFLVALA VGVIVSAAAV VTAKAVWRRD 
APVESPQPAA VAA