Gene Tpau_0165 details

Gene Information

• Locus tag: Tpau_0165
• ID: 9154299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 169391
• End bp: 171394
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 68%
• Product: arabinosyltransferase AftB
• Protein accession: YP_003645158
• Protein GI: 296137915

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.20892
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCGCGGT CTACTTCGCC TGATGCTTCG GCGGTCGGCC GGACCGCCTC GACGAGCTCC 
TTCCCGCTGC CCCGAGTCAC CCTGTGGCTC GGGGTCGCGG CGTGTGCGGT GCTGTTCGGC 
TATGGCGCGT GGCAACGCCG GTGGATCGCC GACGACGGCC TGATCGTGCT GCGTACCGTG 
CGCAACCTCC TGGCCGGGAA CGGTCCCGTC TTCAACATGG GCGAACGCGT CGAGGTCAAC 
ACCTCCGCCG CCTGGACCTA CATCATCTGG TTCTTCTCCT GGATCAGCGG TGTGCAGACC 
GAGTACGTGG TGCTGACGGT GGCGCTGGTG CTGTCCGTCG CCGCGATCCC GCTGGCCATG 
CTCGGCACGG CGCGGCTGTA CAAGGGCGGT GCCGGATGGA AGGGGCTGCG CGGCTCGGGC 
CTGCTGCTGC TCCCCGCGGG CGGCCTCGTC TACATGGCGC TTCCACCCGC GCGGGACTTC 
GCGACGTCCG GCCTCGAGGT CTCGCTCACC ATCTTCTGGG TGGCTCTGCT GTGGTGGCTG 
GCGATCGCCT GGTCGCAGCA GGACCGCGAT CCGCGCGATC CGAAGGACGT GAGGCGGTCC 
TGGATCATCA CGCTCACGAC CGCCTTCGTC GCCGGTCTGT CCTGGCTGGT GCGCCCCGAG 
ATGGCGGTGG TGGGCGGTCT GGTGCTGGTG GTCATGGTGC TCGCGCCGAT CGGCCTCAAG 
CAGCGCCTCG CCGTGATCGC CGTGGCCGGG TTCCTCCCGG TGGCGTACCA GATCTTCCGG 
ATGGGCTACT ACGGCCTCCC GGTGCCGAAC ACCGCGATCG CCAAGGACGC CAGTGGTTCC 
AAGTGGGACC AGGGATTCCT CTACCTCACG AACCTGGTCG AGCCGTACTC ACTGTGGCTC 
CCCGTGGTGG CACTGGCGAT CGCCGTGCCC CTCATCGTGC TCCCCGCTCG CGGTGCCCGC 
ACCCCGCTCA CGGGCGGCTT CCGGCTGCCT CGCGGCGGTG TCACCGGCCT GCGTGACCAC 
CTGCAGCGGC CCGCGGTGAT CGTCGCGGTC ATGTTCCTCG GCGGGGTCAT CGAGACGCTG 
TACTGGTTGC GTCAGGGCGG CGATTTCATG GCCGGCCGTG TGCTGCTCGC TCCGCTGTTC 
CTGTTGCTGT TGCCCGTGAT GGTGATCCCG CTGCGGATTC CGTCGCGGCA GGAGGGCGAT 
TCGCGGATCA AGGGCGCGGC ACGGTTGCTC GGCGGATCCG CCGGCGCCGC CGTCGCCGCG 
GTGCTGTGGG TGTTGGTGAT CGGCTGGGCT CTGCACGCCT CGACCTTCCG GGGGATGCCC 
GACGGTACCG CCATCGGCAA GACCGGCATC GTCGACGAAC GTGCCTTCTA CTCCTTGCAG 
ACCGGGAAGT CGCACCCGAT CACGGCGGAC GACTACCTGG ACTACCCGCG GATGAAGTCA 
CTGCAGGAGA TCCTGCGGCA GACCCCGCGC GGCGGCGTGT ACCTGCCGTC GTTCGACTAC 
GACTGGTGGT TCATCGATCC GCTGCCCTAT CCGCGGCCGC CGGACGTCCC GCTCACCCAG 
ACCGTGTTCT TCACCAACCT GGGCATGACC TCGATGAATC TTCCACTGGA CGTACGGGTC 
TGGGACCAGG TGGGGTTGGC GTGGCCGGTC GCCACGCACA CCGCACGGCT CGAGGACGGG 
CGCATCGGAC ACGATAAGGA GATGTTCCCG GACTGGGCCG TCGCCGAGGC GAAGGCCTAC 
CCGAAGCGGC CCGCACTGCC GCCGCACATC GATCCGAACT GGGTGAACCA GGCGAGGCTC 
GCGCTCACCT GTCCGCAGAT CCAGCAGCTC CGCGACTCCT ATTCGGCGCC GATGACCTTC 
GATCTGTTCA AGCGGAACTT CAAACTCTCC ATCGCGACGA TGGGCATGCG GATCGACCGG 
GTGCCCGAAT ACACCCTGCG CATGTGCCGG ATGGACGTGC CGCCGCCGCT CACCCCCGAG 
CAGTACACGA TGCCCAAGAA CTGA 

 

Protein sequence

MPRSTSPDAS AVGRTASTSS FPLPRVTLWL GVAACAVLFG YGAWQRRWIA DDGLIVLRTV 
RNLLAGNGPV FNMGERVEVN TSAAWTYIIW FFSWISGVQT EYVVLTVALV LSVAAIPLAM 
LGTARLYKGG AGWKGLRGSG LLLLPAGGLV YMALPPARDF ATSGLEVSLT IFWVALLWWL 
AIAWSQQDRD PRDPKDVRRS WIITLTTAFV AGLSWLVRPE MAVVGGLVLV VMVLAPIGLK 
QRLAVIAVAG FLPVAYQIFR MGYYGLPVPN TAIAKDASGS KWDQGFLYLT NLVEPYSLWL 
PVVALAIAVP LIVLPARGAR TPLTGGFRLP RGGVTGLRDH LQRPAVIVAV MFLGGVIETL 
YWLRQGGDFM AGRVLLAPLF LLLLPVMVIP LRIPSRQEGD SRIKGAARLL GGSAGAAVAA 
VLWVLVIGWA LHASTFRGMP DGTAIGKTGI VDERAFYSLQ TGKSHPITAD DYLDYPRMKS 
LQEILRQTPR GGVYLPSFDY DWWFIDPLPY PRPPDVPLTQ TVFFTNLGMT SMNLPLDVRV 
WDQVGLAWPV ATHTARLEDG RIGHDKEMFP DWAVAEAKAY PKRPALPPHI DPNWVNQARL 
ALTCPQIQQL RDSYSAPMTF DLFKRNFKLS IATMGMRIDR VPEYTLRMCR MDVPPPLTPE 
QYTMPKN