Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0165 |
Symbol | |
ID | 9154299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 169391 |
End bp | 171394 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | arabinosyltransferase AftB |
Protein accession | YP_003645158 |
Protein GI | 296137915 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.20892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGCGGT CTACTTCGCC TGATGCTTCG GCGGTCGGCC GGACCGCCTC GACGAGCTCC TTCCCGCTGC CCCGAGTCAC CCTGTGGCTC GGGGTCGCGG CGTGTGCGGT GCTGTTCGGC TATGGCGCGT GGCAACGCCG GTGGATCGCC GACGACGGCC TGATCGTGCT GCGTACCGTG CGCAACCTCC TGGCCGGGAA CGGTCCCGTC TTCAACATGG GCGAACGCGT CGAGGTCAAC ACCTCCGCCG CCTGGACCTA CATCATCTGG TTCTTCTCCT GGATCAGCGG TGTGCAGACC GAGTACGTGG TGCTGACGGT GGCGCTGGTG CTGTCCGTCG CCGCGATCCC GCTGGCCATG CTCGGCACGG CGCGGCTGTA CAAGGGCGGT GCCGGATGGA AGGGGCTGCG CGGCTCGGGC CTGCTGCTGC TCCCCGCGGG CGGCCTCGTC TACATGGCGC TTCCACCCGC GCGGGACTTC GCGACGTCCG GCCTCGAGGT CTCGCTCACC ATCTTCTGGG TGGCTCTGCT GTGGTGGCTG GCGATCGCCT GGTCGCAGCA GGACCGCGAT CCGCGCGATC CGAAGGACGT GAGGCGGTCC TGGATCATCA CGCTCACGAC CGCCTTCGTC GCCGGTCTGT CCTGGCTGGT GCGCCCCGAG ATGGCGGTGG TGGGCGGTCT GGTGCTGGTG GTCATGGTGC TCGCGCCGAT CGGCCTCAAG CAGCGCCTCG CCGTGATCGC CGTGGCCGGG TTCCTCCCGG TGGCGTACCA GATCTTCCGG ATGGGCTACT ACGGCCTCCC GGTGCCGAAC ACCGCGATCG CCAAGGACGC CAGTGGTTCC AAGTGGGACC AGGGATTCCT CTACCTCACG AACCTGGTCG AGCCGTACTC ACTGTGGCTC CCCGTGGTGG CACTGGCGAT CGCCGTGCCC CTCATCGTGC TCCCCGCTCG CGGTGCCCGC ACCCCGCTCA CGGGCGGCTT CCGGCTGCCT CGCGGCGGTG TCACCGGCCT GCGTGACCAC CTGCAGCGGC CCGCGGTGAT CGTCGCGGTC ATGTTCCTCG GCGGGGTCAT CGAGACGCTG TACTGGTTGC GTCAGGGCGG CGATTTCATG GCCGGCCGTG TGCTGCTCGC TCCGCTGTTC CTGTTGCTGT TGCCCGTGAT GGTGATCCCG CTGCGGATTC CGTCGCGGCA GGAGGGCGAT TCGCGGATCA AGGGCGCGGC ACGGTTGCTC GGCGGATCCG CCGGCGCCGC CGTCGCCGCG GTGCTGTGGG TGTTGGTGAT CGGCTGGGCT CTGCACGCCT CGACCTTCCG GGGGATGCCC GACGGTACCG CCATCGGCAA GACCGGCATC GTCGACGAAC GTGCCTTCTA CTCCTTGCAG ACCGGGAAGT CGCACCCGAT CACGGCGGAC GACTACCTGG ACTACCCGCG GATGAAGTCA CTGCAGGAGA TCCTGCGGCA GACCCCGCGC GGCGGCGTGT ACCTGCCGTC GTTCGACTAC GACTGGTGGT TCATCGATCC GCTGCCCTAT CCGCGGCCGC CGGACGTCCC GCTCACCCAG ACCGTGTTCT TCACCAACCT GGGCATGACC TCGATGAATC TTCCACTGGA CGTACGGGTC TGGGACCAGG TGGGGTTGGC GTGGCCGGTC GCCACGCACA CCGCACGGCT CGAGGACGGG CGCATCGGAC ACGATAAGGA GATGTTCCCG GACTGGGCCG TCGCCGAGGC GAAGGCCTAC CCGAAGCGGC CCGCACTGCC GCCGCACATC GATCCGAACT GGGTGAACCA GGCGAGGCTC GCGCTCACCT GTCCGCAGAT CCAGCAGCTC CGCGACTCCT ATTCGGCGCC GATGACCTTC GATCTGTTCA AGCGGAACTT CAAACTCTCC ATCGCGACGA TGGGCATGCG GATCGACCGG GTGCCCGAAT ACACCCTGCG CATGTGCCGG ATGGACGTGC CGCCGCCGCT CACCCCCGAG CAGTACACGA TGCCCAAGAA CTGA
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Protein sequence | MPRSTSPDAS AVGRTASTSS FPLPRVTLWL GVAACAVLFG YGAWQRRWIA DDGLIVLRTV RNLLAGNGPV FNMGERVEVN TSAAWTYIIW FFSWISGVQT EYVVLTVALV LSVAAIPLAM LGTARLYKGG AGWKGLRGSG LLLLPAGGLV YMALPPARDF ATSGLEVSLT IFWVALLWWL AIAWSQQDRD PRDPKDVRRS WIITLTTAFV AGLSWLVRPE MAVVGGLVLV VMVLAPIGLK QRLAVIAVAG FLPVAYQIFR MGYYGLPVPN TAIAKDASGS KWDQGFLYLT NLVEPYSLWL PVVALAIAVP LIVLPARGAR TPLTGGFRLP RGGVTGLRDH LQRPAVIVAV MFLGGVIETL YWLRQGGDFM AGRVLLAPLF LLLLPVMVIP LRIPSRQEGD SRIKGAARLL GGSAGAAVAA VLWVLVIGWA LHASTFRGMP DGTAIGKTGI VDERAFYSLQ TGKSHPITAD DYLDYPRMKS LQEILRQTPR GGVYLPSFDY DWWFIDPLPY PRPPDVPLTQ TVFFTNLGMT SMNLPLDVRV WDQVGLAWPV ATHTARLEDG RIGHDKEMFP DWAVAEAKAY PKRPALPPHI DPNWVNQARL ALTCPQIQQL RDSYSAPMTF DLFKRNFKLS IATMGMRIDR VPEYTLRMCR MDVPPPLTPE QYTMPKN
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