| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0160 |
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| Symbol | |
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| ID | 9154294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 162462 |
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| End bp | 164669 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | SpoIID/LytB domain protein |
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| Protein accession | YP_003645153 |
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| Protein GI | 296137910 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTGT GGATCGACGG CGGTCCCCGT CGCCGCCGCG TACGGCGCAC CCTCGCGATC
GCGATGCTCC CGGCGATCGC CGTGGGCGGC GCGGCCCTGG TGTTCACTGG TGCCACCAGC
ACAGACGACC CGGCCCTCGC GGTCGGCAGC AACGTCACCT TCACCGGACA GGGCAACGGC
CACGGCCGTG GCATGGGCCA GTGGGGCGCC TTCGGTTACG CCAAGGCCGG CTGGAAGGCC
GAGCAGATCG TGGCGCACTA CTACGGCGGC AGCGTGCTGT CCCGTGTCGA TGTGAATCTC
CCCGTCAAGG TCCAGCTCAC CCAGCAGAAG TCGGTCAACG TCTTCGCCCC CGCGGGCGCG
AAGGTCGGCG ACGAGAACGT GGCGCCCGGC CAGGCCGTGC GCATCGACGG TGGTAACGCG
GTCATCACCG AGGGGTGCGG CGGCAAGGTG GTCAAGACGA TCCCGGCCGG AGACGGCACG
GTGAGTCCGG TCAATCCCGC GGCGGGCCGC CCGGAGAACG AGATCCTGCG ATTCTGCGGA
AGCAACGCCA GCTACCGCGG CGCGCTCTCC ACTCAGGACG GCAAGGTCTT CAACACCGTC
AACATCGAGG ACTACCTGCG CAGCGTGGTC CCCGTCGAGA GCAAGGTCGA ATGGGCCGAT
CAGGGCGGTA CCGAGGCGCT GCGCGCCCAG GCCATCGCCG CACGCTCCTA CGCGCTGGCC
GAGAGCGCCA AGCGCGGCGA CCGGTACAAC GACACCCAGG ACTCGCAGGT CTACGGCGGT
TTCGCCAAGG AGGATAAGCG CAGCGACGCC GCAGTCAGCT CCACCGCCGG CCTGGTGATG
GCCAAGGACG GGTTCGCGGT GCCCACGGAG TTCTCCAGCT CGACCGGTGG ATACACCGCG
GGCGGCGACT TCACCGCGGT CAAGGACGAC GGCGACGTGG TCTCCCCGTT CCGGAACTGG
AACCAGTCGG TGCCCGCCAC GAAGATCGCG TCGGAGTTCG GGGTCGGCAA ACTCGAGTCG
ATCCGTATCA CCAAGGTGCA GTCCGCAGCC GCACCCCGGG TCGCGCAGGT CGAGATCAAG
GGCAGCGAGC GCACCGTGAC CGCGTCGGGC GCGGATGTGC GCAAGAAGCT GGGCTTGCGG
TCGGACTGGT TCGTGATCGA CGGCCAGGGC GGTCCGGGTG CCGCGGCTGC ACCGTCGGTG
CCGAGCGCCC CCGCCGCCGG TTCCCAGAAC CCGCCGACGT CGGCCCCCGC CCCCGCGCCG
GTACCCGGCA ACGTGGTGGA CCGTCCGATC ATCGCGGCCC CGGTCGACCC GTTCAACCCG
GTGCCGACGG CGCCGAACTC GTCTCAGATC GCTCCTCCGG GTGCGACCAC GGCGACGGTC
TCGCCCTCCG GGGCCCCCGC AGTTCCGGCC GCACCCGCTG CTCCAGCGGC GCCTGCCGCC
CCCGCGGCGG TACCCGGCGC GGCCACCCCG GCGGCGCCTG CCGCCCCCGC TGCTCCGGCC
GCGCCCGCCG TCCCGACGGT GCCCGCCGCG CCCGGGGGAG CCGCCCCCGC CGTTCCGGCG
GCACCGACCG CCCCCGCTGC GCCGACGATC CCCGGCATCC CCGCGCCCCC GGCGGCCGGC
ACCGGTATCG ATGCGCTGCA GGGCCGAGCC ATCACCGGCA AGGCCGCGGT CGAGGCCGCG
TACCGCTCTG CCGGCGGCGA GAAGGGCACG CTCGGCCCGG TGGTCGCGAA CCCGATCACG
TTCCCGGACG GCTCGATGTT CCAGTCCTAT GCGAACGGCA CGATCTACTA CACGCCGGCC
AACGGTGCGC AGGTCGTCCC GTCGGGTATC GCCGCCCCGG CGACCCTGAT GAACTGGGTC
ACCGCGTTCG CCGCGGGTGG AGCACCGTCG CTCCCGCCGC TGCCGCTGCT CAACCTGATT
CCCGGGTGGG GCGATGTGCT GGGCATCAAC CCCACACAGA GCGACACCCC GCCGGGTGTC
CCCGCGGTGC CGGTGACGCC GGGCGCACCC GCCGCACCGT CGGCCCCCGC GGCACCTGCG
GCACCTGCGG CCCCCGCGGC ACCTGCGGCA CCCGCCGTGC CGGCCGCACC GTCGGCCCCC
GCAGCGGCAC CCGCCGCCCC GGCTCCCGCG GCTTCCGCAC CCGCTGCTCC GGCGGGTTCG
GGGTCCACGC CGCTGCCCGT CCCGACGGTG CCCGGCGCGC CCTCCTGA
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| Protein sequence | MPVWIDGGPR RRRVRRTLAI AMLPAIAVGG AALVFTGATS TDDPALAVGS NVTFTGQGNG
HGRGMGQWGA FGYAKAGWKA EQIVAHYYGG SVLSRVDVNL PVKVQLTQQK SVNVFAPAGA
KVGDENVAPG QAVRIDGGNA VITEGCGGKV VKTIPAGDGT VSPVNPAAGR PENEILRFCG
SNASYRGALS TQDGKVFNTV NIEDYLRSVV PVESKVEWAD QGGTEALRAQ AIAARSYALA
ESAKRGDRYN DTQDSQVYGG FAKEDKRSDA AVSSTAGLVM AKDGFAVPTE FSSSTGGYTA
GGDFTAVKDD GDVVSPFRNW NQSVPATKIA SEFGVGKLES IRITKVQSAA APRVAQVEIK
GSERTVTASG ADVRKKLGLR SDWFVIDGQG GPGAAAAPSV PSAPAAGSQN PPTSAPAPAP
VPGNVVDRPI IAAPVDPFNP VPTAPNSSQI APPGATTATV SPSGAPAVPA APAAPAAPAA
PAAVPGAATP AAPAAPAAPA APAVPTVPAA PGGAAPAVPA APTAPAAPTI PGIPAPPAAG
TGIDALQGRA ITGKAAVEAA YRSAGGEKGT LGPVVANPIT FPDGSMFQSY ANGTIYYTPA
NGAQVVPSGI AAPATLMNWV TAFAAGGAPS LPPLPLLNLI PGWGDVLGIN PTQSDTPPGV
PAVPVTPGAP AAPSAPAAPA APAAPAAPAA PAVPAAPSAP AAAPAAPAPA ASAPAAPAGS
GSTPLPVPTV PGAPS
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