Gene Tpau_0137 details

Gene Information

• Locus tag: Tpau_0137
• ID: 9154271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 142577
• End bp: 143356
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 69%
• Product: Abortive infection protein
• Protein accession: YP_003645130
• Protein GI: 296137887

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGCCC CCGAACCCGT TCCCGCGAGC GAGAAGACAC CGCTGCGCGC GGAGGTGCTG 
ATCGTTCTGC TCGTGACTTT CGGCTGGTCG GGGATGTATT CGCTGATCCG GCTGATCGGC 
TACCAACTCG GCCCGGGGGT GGGCGGTACG ACGGTGAGCC TCAATCCTTC GCGGAGCCCG 
CACATCCCGA TCGATTTCCT GCTCCAGACG CTCACCGCCG TGCAGTTGTT CGCGTGGGCC 
TCGCTCGCCC TGTACCTGCT GTGGCGTTCG GGGATCGGGT TCGCCGACCT CGGCTTCGCG 
CTGCGCGGCT CGCGTCGCGA GTTGCTCAGG AACATCGGTC TGGGCACCGG CCTGGCCGCC 
CTCATCGGGC TCCCCGGCCT CGTCCTCTAC GTGGCCGGAC GGACGCTGGG CGTGACCGCG 
AACGTGCTCC CGGCCGCGGG CGGGGATCCG GGCTGGCGGA TGGTGACCTA CGTCCTCATC 
GCGGCGGGGA ACGCCGTCGC CGAGGAGGTC GTGGTGGTGG GCTACTTCAT GACCCGGCTG 
CGGCAGCTCG GCGTGGGGCG CGCGGGCACG GTCGCCGCAT CCGCGCTGCT CCGCGGCAGC 
TACCACCTCT ACCAGGGCTT CGGTGCGGGC CTGGGCAATG TGGTGATGGG TGTGGTCTTC 
GGTGCCGCCT ACGACCGGTG GCGCAGACTG TGGCCACTGG TCATCGCGCA TTTCGTGATC 
GATGTGGTGG CCTATCTCGG CTATGCACTG CTCAAGGACC ACCTCGGCTT CCTGCGCTGA 

 

Protein sequence

MSAPEPVPAS EKTPLRAEVL IVLLVTFGWS GMYSLIRLIG YQLGPGVGGT TVSLNPSRSP 
HIPIDFLLQT LTAVQLFAWA SLALYLLWRS GIGFADLGFA LRGSRRELLR NIGLGTGLAA 
LIGLPGLVLY VAGRTLGVTA NVLPAAGGDP GWRMVTYVLI AAGNAVAEEV VVVGYFMTRL 
RQLGVGRAGT VAASALLRGS YHLYQGFGAG LGNVVMGVVF GAAYDRWRRL WPLVIAHFVI 
DVVAYLGYAL LKDHLGFLR