Gene Tpau_0126 details

Gene Information

• Locus tag: Tpau_0126
• ID: 9154260
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 134490
• End bp: 135092
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 65%
• Product: Superoxide dismutase
• Protein accession: YP_003645119
• Protein GI: 296137876

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0230866
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCGTCT ACACTCTGCC GGATCTCGAC TATGACTACA GTGCGCTGGA GCCGCACATC 
TCGGGCGAGA TCATGGAGCT GCACCACAGC AAGCATCACG CCACCTACGT CGCCGGTGCG 
AACGCCGCCC TCGAGCAGCT CGCCGAGGCC CGCGAGGACG GCTCCATCGC CACCAAGGCG 
CCGCTGCTCT CGAAGAACCT CGCCTTCCAC CTGGGTGGCC ACACCAACCA CTCGATCTTC 
TGGAAGAACC TGTCCCCCAA CGGTGGCGAC AAGCCGGTAG GCGACCTCGC CGCCGCGATC 
GACGAGTACT TCGGCGGTTT CGACAAGTTC CAGGCGCACT TCACCGCCGT GGCGAACTCG 
CTGCAGGGCT CGGGCTGGTC GGTCCTGGCC TACGACCACA TCGGTCAGCG CCTGGTGATC 
CAGCAGCTCA CCGACCAGCA GGGCAACATC TCGATCAACC TGACCCCGCT GCTCATGCTG 
GACATGTGGG AGCACGCCTT CTACCTCCAG TACAAGAACG TCAAGGCCGA CTACGTCAAG 
GCCTGGTGGA ACGTGGTGAA CTGGGAGGAC GTGGCCGCGC GTTACGCCGC CGCGAAGGGC 
TGA 

 

Protein sequence

MAVYTLPDLD YDYSALEPHI SGEIMELHHS KHHATYVAGA NAALEQLAEA REDGSIATKA 
PLLSKNLAFH LGGHTNHSIF WKNLSPNGGD KPVGDLAAAI DEYFGGFDKF QAHFTAVANS 
LQGSGWSVLA YDHIGQRLVI QQLTDQQGNI SINLTPLLML DMWEHAFYLQ YKNVKADYVK 
AWWNVVNWED VAARYAAAKG