Gene Tpau_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0125 
Symbol 
ID9154259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp133297 
End bp134004 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID 
Productprotein of unknown function UPF0016 
Protein accessionYP_003645118 
Protein GI296137875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0237504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGAATG CATTGCTCGT CAGTTTCGCC GTCGTCTTCG TCGCCGAACT CGGCGACAAG 
TCCCAACTCA TGGCGATGAC GTTCGCCGCC AAGTTCAAAT GGTGGATCGT GCTGGCCGGC 
ATCACGGTCT CGACCGCGGT CGTCCACATC GCCTCCGTCG GCATCGGATA TGCGCTCGGA 
TCCAGCATCC CCACCCAATT GATCACCGCG ATCGCGGGCA TTTCGATGCT GGTGTTCGCA 
TTCTGGACCT GGCGCGGAGA CGCGCTCTCC GACGATGAAT CGACGACCGC CGACCGGGTC 
ACCCGCTCGG TGTTCCTCGC CGTCACCTCG GCCTTCTTCC TCGCCGAACT CGGCGACAAG 
ACGATGCTCG CCACCGTCAC CCTCACCACG CAGTACAACT GGTTCGGCGT GTGGCTGGGC 
TCCACCGTGG GCATGGTCGC CGCCGATGCA CTGGCGATCG CCGTCGGCGC CGTGCTGGGT 
TCGAGGCTGC CCGAGCGAGC GGTGGCGATC GGCGCGACGA TCCTGTTCTT CGGCTTCGGC 
GGCTGGCTGC TGTTCGAGGC CTGGCCCGAG CTCGACGGGG TGGCGCGGAT CGTGACCGGC 
GCGGTGGTCG CGGTGACCGT GGCCGCTGGC CTGTTCGTGG TCCGCCGGGC ACATCACACC 
GCTCTCGCCA ACCCGGCCAC GGCGAAGAAC CCCGATTCAC TAGTGTGA
 
Protein sequence
MLNALLVSFA VVFVAELGDK SQLMAMTFAA KFKWWIVLAG ITVSTAVVHI ASVGIGYALG 
SSIPTQLITA IAGISMLVFA FWTWRGDALS DDESTTADRV TRSVFLAVTS AFFLAELGDK 
TMLATVTLTT QYNWFGVWLG STVGMVAADA LAIAVGAVLG SRLPERAVAI GATILFFGFG 
GWLLFEAWPE LDGVARIVTG AVVAVTVAAG LFVVRRAHHT ALANPATAKN PDSLV