Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0124 |
Symbol | |
ID | 9154258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 132482 |
End bp | 133240 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003645117 |
Protein GI | 296137874 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.087431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTCT CCGGCTCCTC CGTCATCGTC ACGGGCGGCG CTTCGGGCCT CGGTGCCGCC ACCGCCAAGC GCTTCGCCGA GGCCGGTGCC ACCGTCTTCG GCCTCGACCT GCAGCCCTCG ATCGATAAAG CCGCCCCGGT CGATAACGTG CACCTCATCG CCACCGACGT GACCAAGGAG GACGAGGTCA AGGCCGCGAT CGCCGAGGCC GTGAAGGCGG GTCCGCTGCG CGTGGCCGTC AACTGCGCAG GCGTCGGCTG GGCGCAGCGC ATCCTGTCCA AGAAGGGCGT CCACCCGCTC GACCTGTTCC AGACGGTGAT CAACATCAAC CTGGTCGGCA CGTTCAACGT GATGCGCCTG GCCGCCGAAC AGATGAGCCA GCAGGAAACC GCCGACGCGC AGGGCTCGCG CGGGCTCGTC GTGAACACCG CCTCCGTGGC GGCGTTCGAG GGCCAGATCG GCCAGATCGC CTACACGGCC TCGAAGGGCG GCGTGCACGC CATGACGATC ACCGCGGCGC GCGACCTGGC GCAGTTCGGC ATCCGCGTGA ACACGATCGC ACCGGGCACC ATCAACACCC CGATGCTGGC CGGCGTCACC GACGAGTTCA AGAAGACGCT GGAGGCGGGG ATCCCGTTCC CGCAGCGCCT GGGCGAGCCC GCCGAGTACG CGCAGCTGGC GTACTTCCTC GCGGAGCACG ACTACATCAA CGGCGAGACC ATCCGCATGG ACGGCGCTCT CCGGATGGCT CCGCGCTAA
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Protein sequence | MDVSGSSVIV TGGASGLGAA TAKRFAEAGA TVFGLDLQPS IDKAAPVDNV HLIATDVTKE DEVKAAIAEA VKAGPLRVAV NCAGVGWAQR ILSKKGVHPL DLFQTVININ LVGTFNVMRL AAEQMSQQET ADAQGSRGLV VNTASVAAFE GQIGQIAYTA SKGGVHAMTI TAARDLAQFG IRVNTIAPGT INTPMLAGVT DEFKKTLEAG IPFPQRLGEP AEYAQLAYFL AEHDYINGET IRMDGALRMA PR
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