Gene Tpau_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0106 
Symbol 
ID9154240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp112155 
End bp112748 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003645099 
Protein GI296137856 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCACC GCACCCCGAT CACGATCTGG CTCGACCCGG TGTGCCCGTA CTCCTGGCAG 
ACCGCCGCGT GGCTGCGCGA GACCGTCGAC GATCCCGACG CGCTCCGCTG GGAACTGATG 
AGCCTGGCAC TGCTCAACGA AGGCCGCGAC CTGCCCGAAC GGGCCCGCGC ACGGATGCGG 
GACTCGGGCG CCGCGGGCCG GCTCTTCGCC GCGCTCGGGA CGGAACTCGA CGATGCGGCC 
CGATGGCGGG CACTGGCCGC ATTCAGTGCC TGGTACCACC ACGACGCACC AGCCCTCGAC 
GCCGCGCCCG TGGCGCGGCT GCTCACCGAT CTGGGCCTGC CCACCCGGTA CGCCGACGCA 
CTCGCAGACG CTTCCTGGGA CGTCGCCGTC CGCGCGGAGC ACGCCCGCAG CCAGGAAGCG 
GCGGGCGGCA GCGCCGGGAG CCCGCTGGTC CGCATCGGCG AGGCCACCTT CCACGGCCCG 
GTCCTGACCA CCGTCCCCGA GCCGGAAGCC GCCGCGGCGC TGCTCGCCGG ACTCCGCTCT 
CTCGCGGCCG TCGACGCGTT CACGTCGGTC CAGCGGCTGC GCCCCGACCA GTGA
 
Protein sequence
MEHRTPITIW LDPVCPYSWQ TAAWLRETVD DPDALRWELM SLALLNEGRD LPERARARMR 
DSGAAGRLFA ALGTELDDAA RWRALAAFSA WYHHDAPALD AAPVARLLTD LGLPTRYADA 
LADASWDVAV RAEHARSQEA AGGSAGSPLV RIGEATFHGP VLTTVPEPEA AAALLAGLRS 
LAAVDAFTSV QRLRPDQ