| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0081 |
|---|
| Symbol | |
|---|
| ID | 9154215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 87293 |
|---|
| End bp | 89548 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_003645074 |
|---|
| Protein GI | 296137831 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.768822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGATC TCCAATCGGC CGCGCCTCCC GCTTCCGCGG ACGAGTCCGC GGACGCCACG
GCTGAGGCGC AGCGCACCTT CCTCGATGTC GGCGGCATGA CCTGCGCGGC GTGCGTGGGC
CGGGTGGAGC GCAAGCTCAA CAAGCTCGAC GGGGTGCGGG CGGTAGTGAA TCTGGCCACC
CGCACCGCAA CGGTCGAACA TGCGCCGACG GTCACCGTCG AGCAGCTGAC CGGCACCGTC
GAGGCGGCGG GGTACACCGC GGCACCGAAG TCCCCGAACC CGCGCCGCGC AATGCTGGCG
GAGGAGCGCG AGCGGCGCGA CGTGCTGCGC CGCCTCGTCG TCTCACTGGT GCTGTTCGTG
CCGGCCGCCG ATCTGTCGAT CGTGCTCGCC ATCATCCCGT CGACCCGGTT CCCCGGCTGG
CAGTGGGTGC TGCTCGCACT GAGCCTGCCC GTGGTCACGT GGGGCGCCTG GCCGCTGCAC
AAGAAGGCCT GGCAGGGCGC GCGGCACGGT GCGGCGACGA TGGACACCCT GGTCTCGGTG
GGCATCATCT CCGCTACCGC GTGGTCGGTG GTCACCGTGC TCACACCCGG CCGGCAGCGG
CCCGACCCGC ACGGTCTGTG GAACGCGATC GTGCAATCCG ACCCGATCTA CCTCGAGGTC
GCGATGGGCG TCACGGTGTT CGTACTCGCC GGCCGGTACT TCGAGGCCTC CGCACGCGCC
AAGGCGGCTT CGGCGCTGCG CGACCTCTCG ACCCGCGGCG CCCGCGACGT GTCCGTGCTG
GTGCGCGACG GTTCCGAGCT GCGGATCCCG ATCGGCGAGC TGCGCGAGGA CCAGGTGTTC
GTGGTTCGGC CCGGCGAGAC GATCGCCACG GACGGCGTGG TGGAGTCCGG CAGCGCGTTC
GTCGACAATT CGGCGATGAC GGGCGAGTCC CGCCCGGTCC CGGCCGGACC GGGCGACCGA
GTGGTGGGCG GCACCGTGTG CCAGGACGGC CGACTGACGG TGCGCGCCAT CGCCGTCGGC
GAGGACACCA CGTTCGCGGC GATGCTGCGT CTGGTGGAGG ACGCGCAGGC CACGAAGGCG
CGGATGCAGC GCCTGGCCGA TCGCGTCTCG GCGGTGTTCG TGCCGTGCGT GTTCGCCATC
GCCGCCCTGA CTTTCGCGGG CTGGATGCTG TTCGGCGGGT CGATCGACGA TGCCGTGAAG
GCCGCGATCG CCGTGCTGGT GATCGCCTGT CCGTGCGCCC TGGGCCTCGC GACCCCGGTG
GCGTTCATGG TGGCCTCGGG CCGGGGTGCG CAGCTCGGCG TGTACGTACG CGGCCATCAG
GCATTGGAGG CCACCGAGAG CATCGACACG GTGGTCTTCG ATAAGACCGG CACGGTGACC
ACGGGCCTGC TGGAAGTGGC GGCGATCGCC GTGGCGGACG GATTCACCGA GGCCCAGGTG
CTGCGCCTCG CAGGTGCTGT CGAGACCGCC TCCGAGCACG CCGTCGCGCG GGCGGTCGTG
GCGCGGGCGG GCGCCGATCT GCCTGCGGTG GAGGATTTCC GGGCCGTACC CGGCCTCGGC
GCCACGGGTA CGGTGGACGG GCGGACGGTG CGGGTGGGCA ATCCGCGGTT CGTCTCGCCC
GGTGTGCTGG CGCCCGCGGT CGATGCGGCG GCCGAGGCGG GTCGCACCGT GGCCGTGGTG
GAGGTCGACG GGGCTGTGGC CGCCGTCATG GAGATAGCCG ACACGATCAA ACCCGATGCG
CGGGCGGCGA TCACGCGGCT GCACGAGGCC GGCATCACCA CCGTCCTCCT CACCGGCGAC
AATGCCGCCG CGGCCGCGAA AGTGGCTGCG GCCGTGGGCA TCGACGACAT CCGTTCGGAT
GTGCTGCCCG AGGGGAAGGT GGCAGAGATC CGGGCGCTGC AGGCCGAGGG CCGCCGGGTT
GCCATGGTGG GCGACGGCGT GAACGACGGT CCCGCGCTGG CCGCAGCAGA TCTCGGGTTG
GCAATGGGTA CCGGTACCGA CGTGGCCCAA GGTGCCGCCG ATGTGGTGCT GATGCGCGAG
GAGCTGTCCG CCGTTCCCGA TGCGCTCGGC CTGGCCCGCG CCACACTGAA GACGATCAAG
ACGAACCTGG TGTGGGCCTT CGGCTACAAC GTCGCGGCGA TTCCGATCGC GGCCGCCGGA
CTACTGAATC CCCTCATCAG CGCCGCGGCG ATGAGCTTCA GCTCCTTCTT CGTGGTGTGG
AACAGCCTGC GCCTACGTCG ATTCGGCTCC CGCTAG
|
|---|
| Protein sequence | MTDLQSAAPP ASADESADAT AEAQRTFLDV GGMTCAACVG RVERKLNKLD GVRAVVNLAT
RTATVEHAPT VTVEQLTGTV EAAGYTAAPK SPNPRRAMLA EERERRDVLR RLVVSLVLFV
PAADLSIVLA IIPSTRFPGW QWVLLALSLP VVTWGAWPLH KKAWQGARHG AATMDTLVSV
GIISATAWSV VTVLTPGRQR PDPHGLWNAI VQSDPIYLEV AMGVTVFVLA GRYFEASARA
KAASALRDLS TRGARDVSVL VRDGSELRIP IGELREDQVF VVRPGETIAT DGVVESGSAF
VDNSAMTGES RPVPAGPGDR VVGGTVCQDG RLTVRAIAVG EDTTFAAMLR LVEDAQATKA
RMQRLADRVS AVFVPCVFAI AALTFAGWML FGGSIDDAVK AAIAVLVIAC PCALGLATPV
AFMVASGRGA QLGVYVRGHQ ALEATESIDT VVFDKTGTVT TGLLEVAAIA VADGFTEAQV
LRLAGAVETA SEHAVARAVV ARAGADLPAV EDFRAVPGLG ATGTVDGRTV RVGNPRFVSP
GVLAPAVDAA AEAGRTVAVV EVDGAVAAVM EIADTIKPDA RAAITRLHEA GITTVLLTGD
NAAAAAKVAA AVGIDDIRSD VLPEGKVAEI RALQAEGRRV AMVGDGVNDG PALAAADLGL
AMGTGTDVAQ GAADVVLMRE ELSAVPDALG LARATLKTIK TNLVWAFGYN VAAIPIAAAG
LLNPLISAAA MSFSSFFVVW NSLRLRRFGS R
|
|---|
| |