Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0071 |
Symbol | |
ID | 9154205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 73344 |
End bp | 75797 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | aminotransferase class-III |
Protein accession | YP_003645064 |
Protein GI | 296137821 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATGCC GGGGCTGCGG GAGCGGCGAT CTTCACCGGG TGCTCGATCT GGGCGCGGTG CCCGCCGCCG ACCACTTTCC GCCCGCGGAG TCCCCTGTCA CACAGGAGGA ATCGGCGCAC CCGTTGGCGA TGGATCTGTG CGGAGCTTGC GGCCTAGCGC AGCTCGCCGC CGACGACACG GTGACCGACG AGCCGCGCGG AGTGGAACCG CAGGCTCTCA AAGATCAGGC CGCCGATGCC GTGGCCCGCG CTGCGTCCGC CGGCTGGCTC AATGGAAAGA CGGTGCGTGA GTTCGGCAGT CCGCACGGTG GCACCTGGCT GCCGCTGCTC GCCGAGCGCG GTCTTCAGCC CACCGAAGGC CCCGCGGATG TGGTGGTGGA CTGTTTCGGC GTGATGCACG AGCCCGATCA GAAGGCGGCG TTCGCGCGCC GCGCCGCCGC ACTGGCACCG GGTGGGGTGC TCCTGCTCCA ATACCACGCA TTGGGCGCCA TCGTCGCCGG GGAGCAATGG AACGCGCTGC GGCACGGGCA CTTCGCGTAC TACTCCCTGC ATGCGCTGAG CGGGCTCCTG GCAGGTGCCG GTCTCAGCGT CGCCGGTGCC TGGGAGTTCG ATCTGTATGG CGGGACCGTG ATGCTCGCCG TCGTTGAAGG CAGTGTGGCA CCGGACGACA CCGTGTTCCG CCTGCTCGAC GAGGAGGAGC GCGCCGGGCT GCGTGACCCC GCGGTGGTGG GCACCCTCGG CCGGGCAGCG CTCCGGCAGG CGGCCGCGCT CCGGGCCTGG GCGCACGACG AGACGGCCGC CGGCCGGCGG CCGGCCGCCT ACGGAGCCGC CTCGCGGGCG GTGGCGTTGT TCGCGCTCGC CGGTCTGAAC CGTGCCGTGC TGTCCGCCGT CGCCGATGCC AGTCCCGGTA AACAGGGCCG TCGCATGCCC GGCACCGACA TCCCCATCGT CGCGCCCGAG GTCGTGGCGG CAGGCACCGG CCCGGTGTTG CTCACCCTGC CCGACCTGCG CGACGAGCTG GTCGCGGGCT ATCCGGCACT CTCCGACCGA CTGGTGGTCG ACCCGAGCAC GGTCGTCACA TCACCGGTCG CGCTCGAGCC CGACGACGGC CCGCCCCCGC GCGATTTCAC CGAATCGAAC CGACTACAGG CGCGTCTGCA CCAGCTCGTG CCCGGCGGCG CCCACACCTA CGCGCGCGCC TCCGACCAGT ACCCCGAGAA CATGGCACCG ATCCTGACCG GCGGCCTCGG TGCGCGCGTG CAGGACGTCG ACGGTAACGA GTACGTCGAA TACGGAATGG GGCTGCGGGC CGTCACCCTG GGCCATGCGC ATCCGCGCGT CGTGGCCGCG GTCACCGACG CGATCGCCCA CGGCACCAAC TTCAGCCGTC CCACCGCACT GGAGGTGGAC GCCGCCGAGG ACTTCCTCGC CCTGGTGCCC GGCGCCGATA TGGTCAAGTT CGCCAAGAAC GGTTCCGATG CCACGACCGC CGCGGTACGG CTGGCCCGGG CCGCCACCGG GCGCGACCTG GTGGCCGCGT GCGATCACCC GTTCTTCTCC GTCGACGACT GGTTCATCGG TACCACTGCC ATGAACGCGG GCATCCCCGC CGAGGTACCC GCGAAGACTC TGCGATTCCA GTACAACGAT CCCGGTTCCC TGCAGCGCCT GTTCGACGAG AACCCCGGCC GCATCGCCTG CGTCTTCCTG GAGGCGGCGA CCGCCACGGC CGAGCCCGTG GACGGTTTCC TCGAACGCGT CCGGACGCTG TGCGACCGGA ACGGAGCCCT GTTGGTCTTC GACGAGATGA TCACCGGATT CCGGTGGTCC GAGCACGGTG CGCAGGGGCT GTACGGTGTG ATTCCCGATC TGTCCTGTTG GGGTAAGGCC ATGGGCAATG GATTGCCTAT GGCCGCGCTC GCCGGCCGGC GCGAGTACAT GGAACTGGGC GGGCTGAACA CCGATCGCGA CCGCGTCTTC CTCCTGTCCA CCACGCACGG CCCGGAAACC GCCGGTCTGG CGGCCTTCCG CGCTGTGGTC GCCGAGTACG CCGAGTCCGA TCCGATCGGC GCCATGGAGG CCGCCGGCCG CCGGCTCGAG CGGGCGGCCA CCGAGGTGAT CGCGGGGGCC GGGCTCGCCG ACTACGTCCA GGTGATCGGA CGGCCTTCGT GTCAGGTGTT CGTCACCCGC GACGCCGAGG GTGCACCGTC ACAGGCCTAT CGCACCCTGT TCCTGCAGGG ATTGCTCGAG AACGGGGTGC TGGCTCAGTC CCTGGTGAAC TCCGCCGCGC ACACCGAGGC CGATGTCGAT CACACCGTCG ACGCGATCGA GGAAGCCCTC GTCGCCTACG GTCGGGCCGT CGTCGACGGC ACCGTCGAGG GGCATCTGCG CGGGCGTCCG GTGGCTCCCG CGCTGCGCCG CTCCGCCGCC CCCCGCCGCT TGCCCGACGC CTGA
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Protein sequence | MACRGCGSGD LHRVLDLGAV PAADHFPPAE SPVTQEESAH PLAMDLCGAC GLAQLAADDT VTDEPRGVEP QALKDQAADA VARAASAGWL NGKTVREFGS PHGGTWLPLL AERGLQPTEG PADVVVDCFG VMHEPDQKAA FARRAAALAP GGVLLLQYHA LGAIVAGEQW NALRHGHFAY YSLHALSGLL AGAGLSVAGA WEFDLYGGTV MLAVVEGSVA PDDTVFRLLD EEERAGLRDP AVVGTLGRAA LRQAAALRAW AHDETAAGRR PAAYGAASRA VALFALAGLN RAVLSAVADA SPGKQGRRMP GTDIPIVAPE VVAAGTGPVL LTLPDLRDEL VAGYPALSDR LVVDPSTVVT SPVALEPDDG PPPRDFTESN RLQARLHQLV PGGAHTYARA SDQYPENMAP ILTGGLGARV QDVDGNEYVE YGMGLRAVTL GHAHPRVVAA VTDAIAHGTN FSRPTALEVD AAEDFLALVP GADMVKFAKN GSDATTAAVR LARAATGRDL VAACDHPFFS VDDWFIGTTA MNAGIPAEVP AKTLRFQYND PGSLQRLFDE NPGRIACVFL EAATATAEPV DGFLERVRTL CDRNGALLVF DEMITGFRWS EHGAQGLYGV IPDLSCWGKA MGNGLPMAAL AGRREYMELG GLNTDRDRVF LLSTTHGPET AGLAAFRAVV AEYAESDPIG AMEAAGRRLE RAATEVIAGA GLADYVQVIG RPSCQVFVTR DAEGAPSQAY RTLFLQGLLE NGVLAQSLVN SAAHTEADVD HTVDAIEEAL VAYGRAVVDG TVEGHLRGRP VAPALRRSAA PRRLPDA
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