Gene Tpau_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0066 
Symbol 
ID9154200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp68178 
End bp69494 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content65% 
IMG OID 
ProductO-antigen polymerase 
Protein accessionYP_003645059 
Protein GI296137816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.059458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCGAT TGGGGCTGAA CCGGATCGCT GCGCCGGGAG CGCTGTTCCT CGGCGTCGCC 
GGCTTCTTCC TGCTCAGTAT GCGACAGGTT CTTACGGTCC CCGGTACGTT CGGCTACAGC
CTCGCCCAGA CACTGTTCAT GGGCGGCGCC CTTCTCTGGT TCGCGACGGT ACTCACCGGT
CACACCCGTC TGGTGCGAGA TTGGGCGGTG ATCGCCGCCG TGCTGGGTTA CGTCTGCGCG
TCGTTCATCT CGTATGCCGC GGCAGCTGCT CGCGGAATTC TGCCGATCTC GCAGAGCGCT
GTCGATCGGT ATGTCCTTAC GGACCTGATG CTTGCCGGCA CTGTACTGCT GACTCTCACC
GTGCTCCGCA CCCAACACGC CCTGCGCGTG ATGCTCGGTG GGCTCGTGCT CGGCGGCACG
GTGAGCGCGC TGTTCGCGTT GTTGGACTCG AGTACAGGCA TCGACATTGC GGCGCAGTTC
CGGATTCCCG GGCTTACCAA GGGGAGCGAT TACGTCCTCA TCGAGAGCCT TGATCGCGCC
GGCGTCACTC GGCCGCAGGG TAGTGCCGGG CATCCGCTGG AACTCGGCGC GGTTCTCACG
GTGCTCGCGC CGCTCGCGTT GGCTCTGTAC TTCAACGCAA AGAGGCGGGC GGCGGACCCG
AGAGTGGTTC GCCTGTGGCT GGCATGCACT GTGATCATTC TGACCGCCGA TCTGGCAACC
GTATCCCGGT CGGCAGTTGC GGGTGGCCTC GCTGCGATCG CGGTGATGTG CTGGCGCTGG
CCGGTGCAGC GGCTCGCGGC GATTCTCGGA ACCGCTACGG CCGTGGTGGT CGTCGGTGTG
GTCGGCCAAT TGACGTTGGT GACAGCCCTG ATTGAGACCT TCGCCGGCTC ATCGAAGGAT
CCGTCGTTGC AGTCCCGGGA GGTCGGGCGG AACTTCGTGG CGGAGAATCT CGCCGACAAC
TTCTGGTTGG GCCAGGGCGT CGGCGCATAC CCGACCCTGA AACAGCCCGT GCTCGACAAC
CAATACCTGT CCAGGCTGAT GGAAGCGGGA ATCTTTGGCC TGCTGAGCTT GTGCATGGCA
CTCGTTGTCA CCCTGTATCT CGCCGTGCGC GCTTCGCAGT CGAAGGATGA TGCGCTGGCC
GAGCTAGCCG GCGGCATCAG CGGATCCGCG GCGGCGCTGA TCGTCATCTG CCTGATTCTC
GACACCTCTG GCTTCGGGCA GATTTGGTAC TTGACCTGGA TCCTGCTGGC CCTCGCCGGC
GTCGTCTATC GGCTGTCGCG GGTTCGCGAG GGCGAGCTCG CCGCGCCACC GCCCTGA
 
Protein sequence
MERLGLNRIA APGALFLGVA GFFLLSMRQV LTVPGTFGYS LAQTLFMGGA LLWFATVLTG 
HTRLVRDWAV IAAVLGYVCA SFISYAAAAA RGILPISQSA VDRYVLTDLM LAGTVLLTLT
VLRTQHALRV MLGGLVLGGT VSALFALLDS STGIDIAAQF RIPGLTKGSD YVLIESLDRA
GVTRPQGSAG HPLELGAVLT VLAPLALALY FNAKRRAADP RVVRLWLACT VIILTADLAT
VSRSAVAGGL AAIAVMCWRW PVQRLAAILG TATAVVVVGV VGQLTLVTAL IETFAGSSKD
PSLQSREVGR NFVAENLADN FWLGQGVGAY PTLKQPVLDN QYLSRLMEAG IFGLLSLCMA
LVVTLYLAVR ASQSKDDALA ELAGGISGSA AALIVICLIL DTSGFGQIWY LTWILLALAG
VVYRLSRVRE GELAAPPP