Gene Tpau_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0065 
Symbol 
ID9154199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp67342 
End bp68091 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_003645058 
Protein GI296137815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.15873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCG CGACGCAGGA CCGGCCCGGC GCGGTCCGTG ATCACGGCGC TGCCTTCGAG 
AACGAGAGCA GAGCGCCGTC GGGGCGCCGT CGGGTACTGC TCCGCAGGTG GCTGACGTTG 
ATCCTGTTCG TCGTCGTCGC AGTCGTCGGC GCGATGATCG GCTCGAAGAC CACCACCCAG 
CAGTACGAGA CGTCGGGCAC GGTGCTCGTG ATCCCGCCGG GCGCCGGCAG CCCAGTGCCG 
CGGGACAATC CGTTCTACCG GATCAACGAC ACCGCGCAGT TCGCCAATGT GCTCGCGAGC 
ATCGCTCTCG GGCCTGAAGG CCGGGCCGTC GTCGCGAAAG CCGGTGCCTC CCCGGAATAC 
GCCGTGCGCG GCTTCATGGG AGCGACGGAG CAGAGTACGA AGTTGTCCGC GCAGATCACC 
CTGTCGGTGC GAGCGCCGAA CAAATGGGTA GCGCGTGAGG CGGCCATGGG CCTGATCGCG 
CTGATGCGGG AACGACTGGT CTCGTTGCAG CGTGATGCTG GGCTACGCGA CCGCACGTAT 
GCCGATCTCC GCGTCGTCGT GGAACCGGAC CCCGGAGTTC CCGTCTTCGG GAACGCTTTT 
CGTGCGGCGC TGGGGTATGC GATTGCGGCG ATGCTGGGCG TTGCCGCGAT TCTCGCTTTG 
CATGCCTCGC GCGCGGATAC GCGCGCGCGA CGCACCGCTG GCGGAAATGG CTCACTGCGG 
GATGCCGTGC ACGAACGGAC GGCCGCGTGA
 
Protein sequence
MTAATQDRPG AVRDHGAAFE NESRAPSGRR RVLLRRWLTL ILFVVVAVVG AMIGSKTTTQ 
QYETSGTVLV IPPGAGSPVP RDNPFYRIND TAQFANVLAS IALGPEGRAV VAKAGASPEY 
AVRGFMGATE QSTKLSAQIT LSVRAPNKWV AREAAMGLIA LMRERLVSLQ RDAGLRDRTY 
ADLRVVVEPD PGVPVFGNAF RAALGYAIAA MLGVAAILAL HASRADTRAR RTAGGNGSLR 
DAVHERTAA