Gene Tpau_0056 details

Gene Information

• Locus tag: Tpau_0056
• ID: 9154190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 57143
• End bp: 57829
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 70%
• Product: protein of unknown function DUF1361
• Protein accession: YP_003645049
• Protein GI: 296137806

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.16852
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACGG CCCGAGGCGT CCTGTTGGTG GCGTCCCTGC TCGCAACCAC CGCGCTGACC 
GTCGCGCTCG GGGTGACCGA CGCGCAGGCA CCGATGTCCT ACCCCACCCG ATTCCTGGTG 
TGGAACCTCT TCCTGGCCTG GATCCCGATG CTCTGTGCGC TCGGCTTCGC CACGGTCCGC 
GCCCGCGGCG CGCTGGTGCC GCTCGGGGTC GGCTGGCTCG CCTTCCTGCC CAACTCGCCG 
TATCTGGTGA CCGACCTGGT GCACCTCGGT GAGGGCGCGA ACATGTGGCG GCACGTGCTG 
CAGTACGGGT TCGCGGCCTG GACCGGCATC CTGCTCGGCG TGGTCTCGCT GCTGCTGGTG 
CACCGCCGGC TGGAGCGGGA GTTCGGAGCG CGCTGGGGAT GGCTCGCGGT CGCGGTCTCG 
GTGGGCCTGT GCGCCATCGG TGTGGTGATC GGACGGTTCC AGCGCTGGAA CTCGTGGGAC 
CTGGTGACCC GGCCCGACGA CGTGGTCGCC GCCACCCTGG GGTGGATCGG ATCGCCCTTC 
TCGCACGTCG AATCGACCGG CGTCGCGCTC GCGGTAGCGG CCTTCTACGG GCTCGCGTAC 
CTCACCGTCT GGTCGCTGAC CCCCGCCGTG ATCAGCCCCG TTCCGCGGCC AGAAGATTCA 
GCAGATACGC CCCGTACCCG GATTTGA 

 

Protein sequence

MTTARGVLLV ASLLATTALT VALGVTDAQA PMSYPTRFLV WNLFLAWIPM LCALGFATVR 
ARGALVPLGV GWLAFLPNSP YLVTDLVHLG EGANMWRHVL QYGFAAWTGI LLGVVSLLLV 
HRRLEREFGA RWGWLAVAVS VGLCAIGVVI GRFQRWNSWD LVTRPDDVVA ATLGWIGSPF 
SHVESTGVAL AVAAFYGLAY LTVWSLTPAV ISPVPRPEDS ADTPRTRI