Gene Tpau_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0053 
Symbol 
ID9154187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp54737 
End bp55291 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003645046 
Protein GI296137803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0537465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCG AGGCGACCGA TCTTTCCGAC GTGGTGTTGC TCGTCCCCGA GCCCCACCGC 
GACCAGCGCG GCCTGTTCAC CCGGACCTTC GATGCCGAGG AGTTCGACGC GCACCTCGGC 
GTGCCGGGGG CGTCGGCGTC GTTCGTCCAG GATTCGCAAT CGCGCTCGCA CGGCGGTGTG 
GTGCGCGGTC TGCACGGCCG GTCCGGCCGG GGCGAAGCCA AGCTGGTGCG ATGTGCGCAC 
GGTGCCGTCC TCGACGTGCT CGTCGACATC CGGCCCGATT CACCGACGTT CGGGCGGCAC 
GCCAGCTTCC GCTTGGACGA CGAGAACTTC CACCACCTGT ACGTGCCGCC CGGGTTCCTG 
CACGGGTTCC AGGCACTGAC GCCCGTCGCC GACGTCTGCT ACCGGATCGA CCGCCCGCAC 
GATCCGAATG AGGACCTCGG GGTTGTTTAC AACGACCCCG ATTTGGCTAT TTCATGGCCG 
CTGCCTGTGA CGGTCGTCTC ATCTCGGGAA GCAGCGGCCG GGTCCTGGTC CGAGCTCCAG 
CACGGTCTGC GCTGA
 
Protein sequence
MRIEATDLSD VVLLVPEPHR DQRGLFTRTF DAEEFDAHLG VPGASASFVQ DSQSRSHGGV 
VRGLHGRSGR GEAKLVRCAH GAVLDVLVDI RPDSPTFGRH ASFRLDDENF HHLYVPPGFL 
HGFQALTPVA DVCYRIDRPH DPNEDLGVVY NDPDLAISWP LPVTVVSSRE AAAGSWSELQ 
HGLR