Gene Tpau_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0046 
Symbol 
ID9154180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp49326 
End bp49955 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003645039 
Protein GI296137796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGGC TGACGCGGGC GGAACAACGC GCCCAGACGC GTGCCGACCT GTTGATCGCG 
GCGCGCGAGC GTTTCCTGGC CGTGGGGTAC GCGGCCGCGA GCCTCGACGA CATCGCCGAC 
CGGGCCGGCT ACTCCAAGGG CGCGGTGTAT TCGAACTTCG TCGACAAGCC GAATCTGTGC 
CGCGAGGTCC TGCATGCGCT GCATGCCGAC AAGATGGCGG AGATGGCCGC GCTCATCACC 
GGACCCGGCG AACTGCAAGA CCGGATCGAC GGCCTGGCCG AGTGGGTCGA GCGCACCGTG 
GGCGACGTCG GCTGGACCAT GCTCGAGCTC GAGTTCGTCA TCGTCTCCCG CACCGATCCG 
AAGCTGCGCG AGATGGTGGT GGAACTGCGG ACCGCGGCGC ACTGCACCGT CGTCGACATG 
CTGCGCGGGC TCCTCGGTGT CGACGGTGAC GATGCCGACG TGGCCGCCGC CGAGGCGGAG 
CTGTACGAAC TCGAATCCAC CGCCGACTTG CTGCTCAGCG CCGGTATCGG CCTCGGCATC 
CAGCGTGCTG TCGACCCCAC GATCTCGGCG GAGCCGGTGA TCGACACCAT GCGCAGCACG 
CTCACGCTGC TCGCCGTCGG CGCCCGCTGA
 
Protein sequence
MARLTRAEQR AQTRADLLIA ARERFLAVGY AAASLDDIAD RAGYSKGAVY SNFVDKPNLC 
REVLHALHAD KMAEMAALIT GPGELQDRID GLAEWVERTV GDVGWTMLEL EFVIVSRTDP 
KLREMVVELR TAAHCTVVDM LRGLLGVDGD DADVAAAEAE LYELESTADL LLSAGIGLGI 
QRAVDPTISA EPVIDTMRST LTLLAVGAR