Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0029 |
Symbol | |
ID | 9154162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 29957 |
End bp | 31471 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | penicillin-binding protein transpeptidase |
Protein accession | YP_003645022 |
Protein GI | 296137779 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.851817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATACAC CGATCCGCCG CGTCTCCGTC GTCGTGGTCC TGCTCGTGGT CGCGCTCCTC GCGAACGCCA CCTATGTGCA GGTCTTCAAG GCCGACGAGC TCCGTTCCGA CCCGCGCAAC GAGCGGGTCC TGCTCGACGA GTACTCGCGC CAGCGGGGCT CGATCCTCGC GGGCGGCCAG GTGATGGCCC AGTCGGTGCC CACCGACGAC CGGTACAAGT ACCTGCGCAC CTACCCGAAG GACCTCGCGC CGGCGTACGC CCCCGTCACC GGCTATTACT CCATGGTCTA CAGCGCCGGT GCGCTAGAGC ACGCCGAGGG ATCGATCCTC AACGGCAGCG ACGACCGCCT GTTCGGCCGG CGCATCGTCG ACACCCTGTC CGGTCGCGAT CCGCGCGGCG GCAACGTGGT CACCACGATC AACCCGGTGA TGCAGCGCAT CGCCTACGAG CGCTTGATCT CGGCGTGCGG CGCCAAGGGG CCCTGCCACG GCTCCGTGGT GGCGATGGAA CCGCAGACCG GGAAGATCCT CGCGATGGTC TCGACCCCGA GCTACGACCC CAACCCGCTG TCCTCCCACG ATCCGAGCGT GGTCAGCGCG GCCTGGCAGA ACCTCACCAA GGATCCCGAT CAGCCCATGT TGAACCGGGC CACATCGCAG CTGTACCCGC CCGGCTCGAC CTTCAAGGTG ATCACCACCG CGGCGGCGTT GAGCCAGGGC CGCGGGATCG ATCTGAACAC CCGCCTGACC GCCGACAAGC AGATCACCCT CCCGGGCGGC GGTGGCACCA CTCTGCAGAA CTACGCAGGG ATGACGTGCC CGGATTCGTC GGGCGGTACC GTCAGCCTGT TGCAGGCGTT CCAGTACTCG TGCAACACCG CGTTCGTGGA CCTGTCCACC CAGAAGATGC AGGACGGAGG AGAGGCGATC AAGCAGATGG CGAACAACTT CGGCGTGAAC AGCTCGCCCG AACCCATCCC GCTGCCCGTG TCGCAGTCGG TGACCGGCCC GCTGTCCTAC CCCGCGCAGG TGGGGCAGTC GGCGATCGGT CAGCTCGACG TGGCGCTGAC CCCGCTGCAG AACGCGGTGA TCGCGGCGAC CCTGGCCAAC GGCGGTATCC GGATGCAGCC GTACCTGGTG GACAGCCTGC AGTCGCCCGA CCTCTCCACG ATCGCGACCA CCTCCCCGAA GCGGCAGGGA CAGGCGCTGA GCCCGGAGGT CGCGGCGCAG ATGCGGGAGC TGATGGTCGC CTCGGAGCGC AACACCAAGG GCTCGGGAGG CAGCGTCTCG ATCGCGTCGA AGACGGGCAC CGCGGAGCAC TCCGAGGGCC AGAAGGGCGG CGAGGCGCCG CACGCCTGGT ACATCGGGTA CGGCCCGGTC AACGACCCGA AGGTCGCGGT GTCGGTCATC ATTGAGAACG GTGGAAATCA GGGCGAGCAG GCGACCGGTG GGTCGCTCGC GGCGCCCATT GGACGTGCGG TGATAGGCGC CGCGGTGAAC GGGCAGGGGA ACTGA
|
Protein sequence | MNTPIRRVSV VVVLLVVALL ANATYVQVFK ADELRSDPRN ERVLLDEYSR QRGSILAGGQ VMAQSVPTDD RYKYLRTYPK DLAPAYAPVT GYYSMVYSAG ALEHAEGSIL NGSDDRLFGR RIVDTLSGRD PRGGNVVTTI NPVMQRIAYE RLISACGAKG PCHGSVVAME PQTGKILAMV STPSYDPNPL SSHDPSVVSA AWQNLTKDPD QPMLNRATSQ LYPPGSTFKV ITTAAALSQG RGIDLNTRLT ADKQITLPGG GGTTLQNYAG MTCPDSSGGT VSLLQAFQYS CNTAFVDLST QKMQDGGEAI KQMANNFGVN SSPEPIPLPV SQSVTGPLSY PAQVGQSAIG QLDVALTPLQ NAVIAATLAN GGIRMQPYLV DSLQSPDLST IATTSPKRQG QALSPEVAAQ MRELMVASER NTKGSGGSVS IASKTGTAEH SEGQKGGEAP HAWYIGYGPV NDPKVAVSVI IENGGNQGEQ ATGGSLAAPI GRAVIGAAVN GQGN
|
| |