Gene Tpau_0027 details

Gene Information

• Locus tag: Tpau_0027
• ID: 9154160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 26548
• End bp: 28542
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 69%
• Product: serine/threonine protein kinase with PASTA sensor(s)
• Protein accession: YP_003645020
• Protein GI: 296137777

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACCC CGCCGCGTCG CATCAACGAC CGCTATGACC TGGGCGAAAC GCTCGGGTTC 
GGTGGCATGT CCGAGGTGCA CCTGGCGCGG GACACCCGGC TGTCGCGGGA CGTGGCGATC 
AAGATCCTGC GCGCGGATCT GGCGCGGGAT CCGAGCTTCT ACGAGCGGTT CCGGCGCGAA 
GCGCAGAACG CGGCCTCGCT GAATCATCCG ACGATCGTGC AGGTGTACGA CACGGGCGAG 
GCGGACACTC CCGGCGGGCC CCTGCCGTAC ATCGTGATGG AGTACGTCGA CGGCGAGACG 
CTGCGCGATG TGCTGCGTCG CGACGGCACC ATCGCCCCGC AGGCGGCGAT GACCTGGATG 
GCCGATGTGT GTGCGGCGCT GGACTTCAGC CACCGCAACG GGATCGTGCA CCGCGATATG 
AAGCCGGCCA ACGTGATGCT CACCCGCACC GGCGAGATCA AGGTGATGGA CTTCGGCATC 
GCCCGCGCGA TGAGCGATCC GTCGGCGGGG ATGACGCAGA CGGCCGCTGT GATCGGCACC 
GCGCAGTACC TCTCGCCCGA GCAGGCGCGG GGGGAGTCCG TCGATGCCCG CTCGGATGTG 
TACGCGGCCG GCTGCGTGTT GTTCGAGCTG CTCACCGGAC AGCCGCCGTT CCAGGGTGAT 
TCACCGGTGT CGGTGGCCTA CCAGCACGTG CGGGAGGACC CGCCCACTCC GTCGTCGATC 
CTGGACACGG TGCCGCCCGA GCTGGACTCG ATCACGCTCA AGGCGCTGTC GAAGAACCCG 
GCGAATCGGT ACCAGACCGC CGGTGAGATG CGGCAGGACC TGATCCGGGT GCTCGCGGGG 
CGTAAGCCCG AGGCGCCGAT GGTGCTCAGC GACGAGGAGC GCGATGCGCT GCTCACCGAG 
CCCACGAAGC CCCGTCGGGC CGCGAAGGCC GCTCCCGCAG CCGCCGCGGC CGCGGCAGCC 
GTTCCCGCGG CCGCCGCCGG GACGCCGGGT GAACCGACCG GCGACGACGA CCGGCCCACG 
GAGGCCGTGG CCACCGTGCC GGCGGCGAGC GGCCGGGCGA AGCACTCCAC CGCTTCGGGC 
GGCCGCTCGA GGCTGGTGCT GTGGATCTCG GCCGCGATCA TCGCGATCAT CCTGGTGGGC 
GGCACCACGG CGTACCTGCT GGCCGGGCCC GATGAGGCGA AGCAGGTGAC CGTCCCCTCG 
CAGATCGGAC AGAACGCCAG CGACGCGCAG GTCGCGCTGC AGAAGCTCGG CTTCAACGTG 
CAGATCAAGC GCGTCCCCGA TAACACGGTG CCCGCCGAGC AGGTGATCTC CACGATCCCC 
GGCCCGGATT CGCAGGCCAC CGAGGGGTCG ACGGTGATCG TCGAGGTTTC GTCGGGTCCG 
AAGATCGCGG CCGTGCCCGA TGTGGTGAAC CGCTCGGAGA AGGATGCCCG CGACATCCTC 
ACCAAGGCCG GATTCACCGT CGCGAAGGAC CCGAAGAAGG AGGCCTCGCC CACGGTGAAG 
GCGGGCGATG TGGTCTCCAC GAACCCCGCA GTCGGCGCCA ACACCCCGCA GAACACGCCG 
ATCGTGCTCA CCGTCAGCAC CGGCAAGGAG CAGGTCCGGG TCCCGGATGT GTCCAACACG 
GCGCTCTCGC AGGCGGAGGC GAATCTCAAG GGCCTGGGCT TCACCACCAA GGTTCAGGAG 
GTCGACGATC CCGCACCCGC GGGCACGGTG CTCCGCACCA CCCCCGCGGG CGGAACCACC 
GCCGATAAGG GCAGCGACAT CACCATCGTC GTGTCCAAGG CGAAGGCCGT CGTGATGCCG 
AACCTGGTCG GCCAGGATCC GAGCGCGGCG AAGGCGGCGC TCATCGCGAT GGGCTTCTCC 
GAGAGCAATA TCCAGGTGAT GGCCACGGCA CCGTCGAACC TGCCGTGGGA CAAGAACAAG 
GTCTGGAAGA CCACGCCGGA TGCGGGGGCG CGCGTGGACA CCTCCGCCTC GATCACCATC 
GAGGTCCGCC GCTAG 

 

Protein sequence

MTTPPRRIND RYDLGETLGF GGMSEVHLAR DTRLSRDVAI KILRADLARD PSFYERFRRE 
AQNAASLNHP TIVQVYDTGE ADTPGGPLPY IVMEYVDGET LRDVLRRDGT IAPQAAMTWM 
ADVCAALDFS HRNGIVHRDM KPANVMLTRT GEIKVMDFGI ARAMSDPSAG MTQTAAVIGT 
AQYLSPEQAR GESVDARSDV YAAGCVLFEL LTGQPPFQGD SPVSVAYQHV REDPPTPSSI 
LDTVPPELDS ITLKALSKNP ANRYQTAGEM RQDLIRVLAG RKPEAPMVLS DEERDALLTE 
PTKPRRAAKA APAAAAAAAA VPAAAAGTPG EPTGDDDRPT EAVATVPAAS GRAKHSTASG 
GRSRLVLWIS AAIIAIILVG GTTAYLLAGP DEAKQVTVPS QIGQNASDAQ VALQKLGFNV 
QIKRVPDNTV PAEQVISTIP GPDSQATEGS TVIVEVSSGP KIAAVPDVVN RSEKDARDIL 
TKAGFTVAKD PKKEASPTVK AGDVVSTNPA VGANTPQNTP IVLTVSTGKE QVRVPDVSNT 
ALSQAEANLK GLGFTTKVQE VDDPAPAGTV LRTTPAGGTT ADKGSDITIV VSKAKAVVMP 
NLVGQDPSAA KAALIAMGFS ESNIQVMATA PSNLPWDKNK VWKTTPDAGA RVDTSASITI 
EVRR