| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0021 |
|---|
| Symbol | |
|---|
| ID | 9154154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 23079 |
|---|
| End bp | 23600 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003645014 |
|---|
| Protein GI | 296137771 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.447173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCC CACTGCTCGA CGACGTCCAG CCCGCCGACG AGACGTCGCA GGCTCCCTCC
AACGCCCAGC GCGTCGCCAC CGGTTTCGGC CAGAGCTTCA CCGGCCCGCT GAACATCGCC
CGCGGCCTCA CCGGCATCGG CCTCTCGATC GCCAGCCACG TGCTGCACAC CTTCTTCAAC
CTCACCCGCA AGACCATCGC TCTGGCTCTG GCGAAGAAGG TCGTGCACAC GGTCCGTTCG
TCCGACCCGG CCGCGCCGGC CGACGATGCG GCACCGTCGC TCCCGGTGAA GGGCGGGGGC
GTGCGCAAGC CGCTCCTGAT CACCCTGGTC GTAGCGCTGG TGCTGGCCGT AGGCGGCACC
GCTTTCAAGC TGCTGCGCAC TCCGAAGGCC CCGCCCGTCG CGCCGGAACC GCCGCGGGTG
CGTCCGGCGA GCGGCGCCAC CGGCGACAGC GCTCCGGCGG CCTCCGACGA GGAGACCGCG
GCCGTGGTGG CCGACGAAGA CCCGCGCAAG ATCGGCGAAT AG
|
|---|
| Protein sequence | MATPLLDDVQ PADETSQAPS NAQRVATGFG QSFTGPLNIA RGLTGIGLSI ASHVLHTFFN
LTRKTIALAL AKKVVHTVRS SDPAAPADDA APSLPVKGGG VRKPLLITLV VALVLAVGGT
AFKLLRTPKA PPVAPEPPRV RPASGATGDS APAASDEETA AVVADEDPRK IGE
|
|---|
| |