Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0006 |
Symbol | |
ID | 9154137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 6380 |
End bp | 7675 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | glycosyl transferase family 28 |
Protein accession | YP_003644999 |
Protein GI | 296137756 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCATTG CGATCGCTTG TATGGGTTCG CGCGGCGATA TCAGCCCCCT TCTGGCAGTG GGCCGCGTGT TCGCCGACCG CGGCGACACC GTGACGATCG GCTGCACGGT CGAATCCCGG GACTTCGTGC GCTCGCACGG ATTCGAGCCG CGCATTCTGA CCACCCTCAA TCTCAAGGAA TTCCTCCAAT CGCCTCTCGG GCAGGAGAAG TTCTTCGGTA CCGGCACCGC CACGCAGCTA CGGGCCGTGG GCAAACTGGC AGACTCGCAC GCCGACGAGT TCGACGAGCA CCTCGCGCAG TTGTGCGCGG ACGTCGACTG CGTGATCAGC ACCAGGATCA TCGAAGAGCG CGCGGCCCTG GTCACCCACC GGAACGGCAC ACCGCTGGTG ATGCTCGAGT ACTTCCCGGG CGATGCGCAC AGCACCGTGC CGAATCCCTT GCTCGGACCG CGGCTCCAGG ACATCACCGC CACGATCCCG GTACTGCTGC CGCTCACCTA CCGGATCTTC GATATCGGCT GGGCCCTCAG CATCGCCAAG AAGACTCTGC ACCTGGCCAA GCGCGTCGGC TATCCCCGGC GGATCATCAA CCCGCGGTCT GTTCTCAACG GCCGTGACAT CCTTCGCGTC GAGGCCTTCG GCACCGCGCT GGTACCGCCG CGCACGCGGA GCGACGCGCG GCAGCCTCGG ATCGGATTCA TCCGGATCGA GGGCCGTCCC GCGGATCGCG CCGCCCGTGA CCGGGCGGTC GAGGCGTGGA TCGACAGCGA CGACCGTCCG TTCGTCTACC TGGGTTTCGG CAGCATGCCG ATCGTCGACT TCGACGGCGT GGTGACGGAA CTCGCCGCCA CCCTGGCCGG TGAGGGACTA CGCTTGATCG CCGTCCCCGG ATGGTCTGCG CGCACGGGCG ACGAGGTCGT CGAGACGCCG GACCTGCTGG TGCTGCCGGA TATCGACCAC GACGCGGTTT TCCCGCGCTG CGCGGCGATC GTCCATCACG GCGGCGCCGG GACCACCGCC ATCGCAGCGG CCTCCGGTCG GCCCTCACTG GTCTGCAGTC AGGCCTTCGA TCAGCACTTC TGGGGTCGGC GGATCGAGGC AGCCGGTGCC GGTGCGCTGC TCTCGCGCCG TCGGATGTCG GCGCGCACGA TCGCCGAGGC AGTGCTCTCG CTGGTGCGCG ACGATGCGGT GGTGGCGGGT GCACGCCGGC TCGGCGAGGT AGCGGCGGAA GACCTGCGCG GGCGTGACCA GTTCATCGAG GCCTTCGACG CGTTCGTGGC CGAGACCGGT CGTTGA
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Protein sequence | MRIAIACMGS RGDISPLLAV GRVFADRGDT VTIGCTVESR DFVRSHGFEP RILTTLNLKE FLQSPLGQEK FFGTGTATQL RAVGKLADSH ADEFDEHLAQ LCADVDCVIS TRIIEERAAL VTHRNGTPLV MLEYFPGDAH STVPNPLLGP RLQDITATIP VLLPLTYRIF DIGWALSIAK KTLHLAKRVG YPRRIINPRS VLNGRDILRV EAFGTALVPP RTRSDARQPR IGFIRIEGRP ADRAARDRAV EAWIDSDDRP FVYLGFGSMP IVDFDGVVTE LAATLAGEGL RLIAVPGWSA RTGDEVVETP DLLVLPDIDH DAVFPRCAAI VHHGGAGTTA IAAASGRPSL VCSQAFDQHF WGRRIEAAGA GALLSRRRMS ARTIAEAVLS LVRDDAVVAG ARRLGEVAAE DLRGRDQFIE AFDAFVAETG R
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