Gene Tpau_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0006 
Symbol 
ID9154137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp6380 
End bp7675 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content68% 
IMG OID 
Productglycosyl transferase family 28 
Protein accessionYP_003644999 
Protein GI296137756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCATTG CGATCGCTTG TATGGGTTCG CGCGGCGATA TCAGCCCCCT TCTGGCAGTG 
GGCCGCGTGT TCGCCGACCG CGGCGACACC GTGACGATCG GCTGCACGGT CGAATCCCGG
GACTTCGTGC GCTCGCACGG ATTCGAGCCG CGCATTCTGA CCACCCTCAA TCTCAAGGAA
TTCCTCCAAT CGCCTCTCGG GCAGGAGAAG TTCTTCGGTA CCGGCACCGC CACGCAGCTA
CGGGCCGTGG GCAAACTGGC AGACTCGCAC GCCGACGAGT TCGACGAGCA CCTCGCGCAG
TTGTGCGCGG ACGTCGACTG CGTGATCAGC ACCAGGATCA TCGAAGAGCG CGCGGCCCTG
GTCACCCACC GGAACGGCAC ACCGCTGGTG ATGCTCGAGT ACTTCCCGGG CGATGCGCAC
AGCACCGTGC CGAATCCCTT GCTCGGACCG CGGCTCCAGG ACATCACCGC CACGATCCCG
GTACTGCTGC CGCTCACCTA CCGGATCTTC GATATCGGCT GGGCCCTCAG CATCGCCAAG
AAGACTCTGC ACCTGGCCAA GCGCGTCGGC TATCCCCGGC GGATCATCAA CCCGCGGTCT
GTTCTCAACG GCCGTGACAT CCTTCGCGTC GAGGCCTTCG GCACCGCGCT GGTACCGCCG
CGCACGCGGA GCGACGCGCG GCAGCCTCGG ATCGGATTCA TCCGGATCGA GGGCCGTCCC
GCGGATCGCG CCGCCCGTGA CCGGGCGGTC GAGGCGTGGA TCGACAGCGA CGACCGTCCG
TTCGTCTACC TGGGTTTCGG CAGCATGCCG ATCGTCGACT TCGACGGCGT GGTGACGGAA
CTCGCCGCCA CCCTGGCCGG TGAGGGACTA CGCTTGATCG CCGTCCCCGG ATGGTCTGCG
CGCACGGGCG ACGAGGTCGT CGAGACGCCG GACCTGCTGG TGCTGCCGGA TATCGACCAC
GACGCGGTTT TCCCGCGCTG CGCGGCGATC GTCCATCACG GCGGCGCCGG GACCACCGCC
ATCGCAGCGG CCTCCGGTCG GCCCTCACTG GTCTGCAGTC AGGCCTTCGA TCAGCACTTC
TGGGGTCGGC GGATCGAGGC AGCCGGTGCC GGTGCGCTGC TCTCGCGCCG TCGGATGTCG
GCGCGCACGA TCGCCGAGGC AGTGCTCTCG CTGGTGCGCG ACGATGCGGT GGTGGCGGGT
GCACGCCGGC TCGGCGAGGT AGCGGCGGAA GACCTGCGCG GGCGTGACCA GTTCATCGAG
GCCTTCGACG CGTTCGTGGC CGAGACCGGT CGTTGA
 
Protein sequence
MRIAIACMGS RGDISPLLAV GRVFADRGDT VTIGCTVESR DFVRSHGFEP RILTTLNLKE 
FLQSPLGQEK FFGTGTATQL RAVGKLADSH ADEFDEHLAQ LCADVDCVIS TRIIEERAAL
VTHRNGTPLV MLEYFPGDAH STVPNPLLGP RLQDITATIP VLLPLTYRIF DIGWALSIAK
KTLHLAKRVG YPRRIINPRS VLNGRDILRV EAFGTALVPP RTRSDARQPR IGFIRIEGRP
ADRAARDRAV EAWIDSDDRP FVYLGFGSMP IVDFDGVVTE LAATLAGEGL RLIAVPGWSA
RTGDEVVETP DLLVLPDIDH DAVFPRCAAI VHHGGAGTTA IAAASGRPSL VCSQAFDQHF
WGRRIEAAGA GALLSRRRMS ARTIAEAVLS LVRDDAVVAG ARRLGEVAAE DLRGRDQFIE
AFDAFVAETG R