Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_3715 |
Symbol | |
ID | 9147631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 4104820 |
End bp | 4106562 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | integral membrane protein MviN |
Protein accession | YP_003638782 |
Protein GI | 296131532 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.516983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0169056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGGCA CGACACCACC CCCGGGGGAC CCGCAGGACG TCCCGGGCGG GCCGGGCGGC GGCGCCCCGA CGGGCGCCGC AGGGGACCCG CCCGCGAGCG CCACGTCCGA CAGCGGGGTG CGGCGCGGCG CCGCGCTCAT GGCGGGCGGG ACTGCCGTGT CCCGGCTGCT GGGCTTCCTG CGGGCGATGG TCGTCATCGC CGCGGTCTCG GCGACCGGTC AGGTCGCCGA TGCGTTCTCC GTCGCCAACA AGCTGCCGAA CGTGCTCTAC ATGCTGCTCG CGGGCGGCGT CCTCAACGCG GTCCTCGTGC CGCAGGTCGT CCGCGCGTAC AAGCGCGACG CCGGCCAGGA GTACGTCGAC CGGCTCCTCA GCTTCGGGTT CACGGTCCTC GCCGGCGCCA CCGTCGCGCT CACGCTCGCC GCACCGCTGC TCGTGCGGCT CTACGCCGAC GCGTGCAGCC CTGCGCAGAC CTCGCTGGCC ACGAGCTTCG CGTACTGGTG CGTGCCGCAG CTGTTCTTCT ACGGCGCCTA CGCCCTGCTC GGCCAGGTGC TCAACGCCCG CGGGTCGTTC GGGCCGTACA TGTGGGCGCC TGTCGTCAAC AACCTCGTGT CGATGGCCGG GTTCGGCGTG TTCATCGCGC TCGTCGGCCA GGTGCGGTCC GCCGAGGAGC TCACGGCGGG TCAGGTCGCG CTCTTCGGCG GGTCGTCGAC GCTCGGCGTC GTCGCGCAGG CCCTCGTGCT GGTGCCGTTC CTGCGGCGCG CGGGCGTGCG GTACCGCTGG CGGTGGGGGC TGCGCGGCTC CGGGCTGGGG CGGGCCGGGA CCGTCGCGAC GTGGACGTTC CTCGGCCTGG CGATCGGGCA GCTCGGGTAC GTCGTCGTCT CCCGCGTGGC GTCCGCTGCG CCCGGCGAGA CCTGCGACCC GTCCACCGCG ATCGCGGGCA ACGCGGCGTA CGACTACGCG TTCATGCTGT TCATGCTGCC GCACTCGCTC GTCACGGTGT CGCTGGCGAC GGCGCTGTTC ACGCGCCTGT CGGCGCAGGC GCACGATGCC GACGTCGACG GGGTCCGCGC CGGCCTGTCG TCGGGGATGC GGGTCGTCGG GCTGTTCACG CTGCTCGCGG GCGCCGGGCT CGTGGTGCTC GCCGAGCCCG TCGTCCGGCT CATCATGCCG AGCGAGTCGC AGGACGGCGC CGTCCAGGCG GTGGCCGGTG TCCTCGTCGC CATGGCCGTG GGTCTGCCCG CCTTCGGCGC GTGGTCGATG TGCCAGCGGG TCTACTACGC CTACGAGGAC GCCAAGGGCA TGGTGCCCGT GCAGGTCGTC ATGGCCGTCG TCGTCGCCGG GGGCGCGCTG CTGAGCCGGG CCCTGCTGCC CAACAGCTCG TGGGTCGCGG GCGCGGGTGC GGCCATGAGC GTGTCCTACC TGGTCGGTAC GGTCCTGGCG ATGCGCGCGC TGCGAGGCCG GCTCGCGGGG CGCATCGACG GCGGGCAGAT CGTGCGCACG CACGTCCGCG CCGGGCTCGG TGCGCTCGCC GCCGCCGGCG CCGGCTGGGG CGTCCTCCAG GTGCTGCAGG GCTCCGGCCC GGGCGGGTTC GTGGGAGCCG TGCTGCAGTG CGTGGTCGTC GCGGGCGTGA TGGGGTTGGT GTACCTCGGG GCGCTGCGCC TGCTGCGCGT CAGGGAGCTC GACCTGCTCC TCGCACCGGT GACGAGCCGG CTACGGCGGC GCCTCGGACG CCGGTCCGTC TAG
|
Protein sequence | MSGTTPPPGD PQDVPGGPGG GAPTGAAGDP PASATSDSGV RRGAALMAGG TAVSRLLGFL RAMVVIAAVS ATGQVADAFS VANKLPNVLY MLLAGGVLNA VLVPQVVRAY KRDAGQEYVD RLLSFGFTVL AGATVALTLA APLLVRLYAD ACSPAQTSLA TSFAYWCVPQ LFFYGAYALL GQVLNARGSF GPYMWAPVVN NLVSMAGFGV FIALVGQVRS AEELTAGQVA LFGGSSTLGV VAQALVLVPF LRRAGVRYRW RWGLRGSGLG RAGTVATWTF LGLAIGQLGY VVVSRVASAA PGETCDPSTA IAGNAAYDYA FMLFMLPHSL VTVSLATALF TRLSAQAHDA DVDGVRAGLS SGMRVVGLFT LLAGAGLVVL AEPVVRLIMP SESQDGAVQA VAGVLVAMAV GLPAFGAWSM CQRVYYAYED AKGMVPVQVV MAVVVAGGAL LSRALLPNSS WVAGAGAAMS VSYLVGTVLA MRALRGRLAG RIDGGQIVRT HVRAGLGALA AAGAGWGVLQ VLQGSGPGGF VGAVLQCVVV AGVMGLVYLG ALRLLRVREL DLLLAPVTSR LRRRLGRRSV
|
| |