Gene Cfla_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCfla_3488 
Symbol 
ID9147404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCellulomonas flavigena DSM 20109 
KingdomBacteria 
Replicon accessionNC_014151 
Strand
Start bp3878665 
End bp3879462 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content79% 
IMG OID 
ProductHelix-turn-helix type 11 domain protein 
Protein accessionYP_003638561 
Protein GI296131311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.483454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACC GCACCAGCCC GACCTCCCGC GCGCTGCTCG CCCTCGCCGA GCTGCAGGCT 
GCACCGGGTC TCACGGCCGC AGGCCTGGCC ACGGCTCTCG GGGTGTCCGA GCGGGCCGCG
CGCCGCTACG TCGCGGTCCT GCGCGCGGCC GGTGTCCCGG TGACGTCCGA GCGCGGACCG
TACGGCGGGT ACCGGCTCGG GCGCGGCGTG CGCATGCCGC CCCTGGTCTT CGGCGCCGAC
GAGGCCCTCG GTCTGGTCAT GGCCGTGCTC GACGGCCACC ACGACGTGCG CGACCGCACC
GACCCTGTCG CCTCCGCGCT CGAGAAGCTG CTGCGGGCGC TGCCCGAGCG TGTCGCCGCG
CAGGCGTCCG TCGTGCGGCG CTCGACGGCC GCCGCGCCCG ACCGCGGCGC TGCCCGGCCC
GACCCGGCCC TCACCGCCGC GCTCGTGCAG GCCTGCGCCG ACCGCCGGCC CGTCCGCGTC
CGGTACCGCT CCGAGCCGGG GCACGAGTGG GGCGCGGACG TGGACCCGTG GGCGGTCGTG
GTGCGGCACG GGCGGTGGTA CCTCGTGTGC CGGCGGCACG ACGGCGACGT CGCCCGTCAC
CTGCCGGGCG GGCTGGGCAC GCTCGCGCGC GTCGACGCCA CCACCACGCG GCTGCGGGGG
ACGACGAGCA ACCCCGCCTG GTACGCCGAG CAGCTCGCGG CGGTGCCGGT GCCGTTCCGG
GTCGTCGGCG GGCCGAAGCT GCGCGCGTGC GTGCGGGAGG TGGCGGCGCG CCTGGCCGCG
GCGGTCGCGG ACGCCTGA
 
Protein sequence
MTDRTSPTSR ALLALAELQA APGLTAAGLA TALGVSERAA RRYVAVLRAA GVPVTSERGP 
YGGYRLGRGV RMPPLVFGAD EALGLVMAVL DGHHDVRDRT DPVASALEKL LRALPERVAA
QASVVRRSTA AAPDRGAARP DPALTAALVQ ACADRRPVRV RYRSEPGHEW GADVDPWAVV
VRHGRWYLVC RRHDGDVARH LPGGLGTLAR VDATTTRLRG TTSNPAWYAE QLAAVPVPFR
VVGGPKLRAC VREVAARLAA AVADA