Gene Cfla_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCfla_3460 
Symbol 
ID9147376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCellulomonas flavigena DSM 20109 
KingdomBacteria 
Replicon accessionNC_014151 
Strand
Start bp3853237 
End bp3855216 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content77% 
IMG OID 
Productpenicillin-binding protein transpeptidase 
Protein accessionYP_003638533 
Protein GI296131283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.190322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGCGG AGCGGACGAC GGTGCGGCGC CAGGGCCCAC GACGGGTGCT GGCGGGTGTG 
GTGCTGGCAC TGTCGGGCGT GACTCTCCAG GCGTGCAGCG CGAGCGTGCC CGACGCGCGG
CCCGCCGCCG AGGCGCTCGC CGCGGCCCTG GGGTCCGGCG ACTTCACGGC GGTGCCGCTC
GCCCCCGACG CACCGGCGCC CGACGAGCTC GCCGCGACCC GCACGGCCGT CGTCGACGGG
CTGGGCCGGG CCACGGCGAC CGTCGACGTC GGCGACGTCG AGGTCGCGGA GGACGAGCTG
ACGGCCACCG CGCCCCTCGA GGTCACGTGG GACCTGCCGT GGGTGGAGCA GGACTGGACG
TACACCGCGA CCGCGCAGCT CGTGCGTGAC GAGGAGGACG AGGAGCAGCC GTGGCGCGCA
CGCTGGGCGC TGTCGCTGCT GGCGCCGGAC CTGACGACGG GTGAGAGCCT GACGCTCGTG
CGCCGGCCCG CCGAGCGCGG TGCCGTGCTC GGCCAGGGCG GCACGCCGCT GGTGGAGAAG
CGACCCGTGT CCCGCATCGG CATCGACAAG CAGCGCCTGG CCGAGACCGG TGGCGACGCC
GACGCGGCGG CCCGCGGCCT GGCGACCGCG CTCGGCATGG ACCCCGAGGC GTACGCGCAG
CGCGTCGCGA GCGCGGGCCC GCAGGCGTTC GTCGAGGCGA TCGTCGTGCG CGCGGGCGAC
GCGTCGTACG ACCTCGTCGC GCTCGGCGAC CTGCCCGGCG TGAACCTCGT GCCCGACGAG
CTGCCCCTGG CACTGACGCG CACGTTCGCG CGCGCGATCC TCGGCACGGT CGGCGACGCG
ACCGCCGAGA TCGTCGAGGC GTCGGACGGG GAGGTCGTGG CGGGGGACAA GGCGGGCCTG
TCCGGGCTGC AGCGCCAGTA CGACACCCAG CTGCGCGGCA CCCCGGGCGT CGTCGTCACG
GCGGTGGGCC AGAGCGGCGC CGAGCGGGTG CTGCTCGACG TCCCGCCGGT CGACGGCGAG
CCCTTGCAGA CGTCGATCGA CCCCGCGCTG CAGCAGCGCG CGGAGGACGT GATCGGTGCG
CTCGTGCCGG CCTCGGCGAT CGTGGCGGTC CGCCCGTCGA CGGGTGAGGT GCTCGCCGCC
GCGAACGGCC CGGGCAGCGG GGGGCTGTCC ACCGCGACCG TGGGGCAGTA CGCGCCAGGC
TCGACGTTCA AGGTGGTGAG CGCGCTGGCG TACCTGCGCG GCGGGCTGAC GCCGGAGTCC
GCGGTGAGCT GCCTGCCGTC GATCACGGTC GACGGGCGGA CCTTCCAGAA CTTCCCCGGG
TACCCGGCCG CCGCGCTCGG CGACGTGCCG TTCCGCACGG CCTTCGCGAA CTCCTGCAAC
ACGGCGTTCA TCGCGGCGCG CGACCTGGCC GCCGACGGAG GGCTGCTCGC CGCCGCGCGC
TCGCTGGGCC TGGAACCGGC GGCCGAGCTC GGGTTCCCGG CGTTCCTCGG CACGGTCCCG
GACGACGCGT CCGCCACCGC GCACGCGGCG TCGGTCATCG GTCAGGGCGA GGTGCTCGCC
TCGCCCCTGG GCATGGCGAC CGTCGCGGCG TCGGTCGCCG CGGGCCGCAC CGTCGTCCCC
ATCCTGGTGA CGCCGGGCGC CGACTCCGCA GCACCCGACG GCGCCGTCTC CGACGCGCCG
AGCGACGACG CCACGACGCT GCCGCCGGCC ACGCCCCTGA CGGCTCCGGA GGCCGAGGCG
CTGCGCACGA TGATGCGCGC CGTCGTCACC GAGGGCGGCG CCGGCCTGCT CGCGGACCTC
CCGGGTGAGC CGGTGCTCGC CAAGACCGGC ACCGCCCAGT TCGGCACGGA CGCGGACCTG
CGCAACCACG CCTGGATGAT CGCGATCCAG GGTGACCTGG CGGTCGCGGT GTTCGTGGGC
GAGGGGGACT ACGGTTCGAC GACGGCCGGC CCGCTCCTCG AGGCGTTCCT GGCCGGCTGA
 
Protein sequence
MRAERTTVRR QGPRRVLAGV VLALSGVTLQ ACSASVPDAR PAAEALAAAL GSGDFTAVPL 
APDAPAPDEL AATRTAVVDG LGRATATVDV GDVEVAEDEL TATAPLEVTW DLPWVEQDWT
YTATAQLVRD EEDEEQPWRA RWALSLLAPD LTTGESLTLV RRPAERGAVL GQGGTPLVEK
RPVSRIGIDK QRLAETGGDA DAAARGLATA LGMDPEAYAQ RVASAGPQAF VEAIVVRAGD
ASYDLVALGD LPGVNLVPDE LPLALTRTFA RAILGTVGDA TAEIVEASDG EVVAGDKAGL
SGLQRQYDTQ LRGTPGVVVT AVGQSGAERV LLDVPPVDGE PLQTSIDPAL QQRAEDVIGA
LVPASAIVAV RPSTGEVLAA ANGPGSGGLS TATVGQYAPG STFKVVSALA YLRGGLTPES
AVSCLPSITV DGRTFQNFPG YPAAALGDVP FRTAFANSCN TAFIAARDLA ADGGLLAAAR
SLGLEPAAEL GFPAFLGTVP DDASATAHAA SVIGQGEVLA SPLGMATVAA SVAAGRTVVP
ILVTPGADSA APDGAVSDAP SDDATTLPPA TPLTAPEAEA LRTMMRAVVT EGGAGLLADL
PGEPVLAKTG TAQFGTDADL RNHAWMIAIQ GDLAVAVFVG EGDYGSTTAG PLLEAFLAG