| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_3399 |
|---|
| Symbol | |
|---|
| ID | 9147315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 3779938 |
|---|
| End bp | 3780864 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | Transketolase central region |
|---|
| Protein accession | YP_003638475 |
|---|
| Protein GI | 296131225 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00806614 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCTCA TGGGCGAGGA CATCGGCCGC CTCGGCGGCG TGTTCCGCGT CACCGACGGG
CTGTTCGCCG AGTTCGGCGA GGACCGCGTC GTCGACACCC CGCTCGCCGA GTCCGGCATC
GTCGGCACCG CGATCGGCCT CGCGCTGCGC GGCTACCGGC CCGTCTGCGA GATCCAGTTC
GACGGGTTCG TGTTCCCCGC GTTCGACCAG ATCACCACGC AGCTCGCCAA GATGCACTAC
CGCTCGCAGG GCCGCCTGCG CCTGCCCGTC GTCATCCGCA TCCCCTACGG CGGCGGCATC
GGCGCGATCG AGCACCACAG CGAGTCGCCC GAGGCGCTGT TCGCGCACAC GCCCGGCCTG
CGCGTCGTCT CGCCGTCCAC GGCCGCCGAC GGCTTCACGA TGATCCAGCA GGCGATCGCG
TCGCCGGACC CCGTGATCTT CCTCGAGCCC AAGGGCCGCT ACTGGGAGAA GGGCGACGTC
GACCTCGACG CGCCCCTGCC CGCCCCGCAC GGCGCCCCCG CCGACCTCGA CCACGCGCGC
GTCGTGCGCC CCGGCACCGA CGTCACCGTC GTCGCCTACG GCCCCACGGT CGCCACCGCG
CTCAAGGCCG CCGAGGCCGC GGCCGCGGAG GGCACGAGCC TGGAGGTCAT CGACCTGCGC
ACGATCTCGC CGATCGACAC CGCGACCGTC GCCGCGTCGG TGGCGCGCAC CGGCCGCTGC
GTCGTCGTCC ACGAGGCGCC CGTGCTGTAC GGCACCGGCG CCGAGGTCGC GGCGCGCGTC
ACCGAGGAGT GCTTCTTCCA CCTGCAGGCG CCCGTGCTGC GCGTCGGGGG CTTCCACACG
CCGTACCCGG TCTCCAAGGT CGAGCACGAG TACCTGCCCG GTCTCGACCG GCTGCTCGAC
GCCGTCGACC GCGCCCTCGC GTTCTGA
|
|---|
| Protein sequence | MLLMGEDIGR LGGVFRVTDG LFAEFGEDRV VDTPLAESGI VGTAIGLALR GYRPVCEIQF
DGFVFPAFDQ ITTQLAKMHY RSQGRLRLPV VIRIPYGGGI GAIEHHSESP EALFAHTPGL
RVVSPSTAAD GFTMIQQAIA SPDPVIFLEP KGRYWEKGDV DLDAPLPAPH GAPADLDHAR
VVRPGTDVTV VAYGPTVATA LKAAEAAAAE GTSLEVIDLR TISPIDTATV AASVARTGRC
VVVHEAPVLY GTGAEVAARV TEECFFHLQA PVLRVGGFHT PYPVSKVEHE YLPGLDRLLD
AVDRALAF
|
|---|
| |