| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_3368 |
|---|
| Symbol | |
|---|
| ID | 9147284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 3742900 |
|---|
| End bp | 3745104 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | NERD domain protein |
|---|
| Protein accession | YP_003638446 |
|---|
| Protein GI | 296131196 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000355781 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAC GCTTTCCGGC CGATAGAGAA GAGTCCGACC GGGAGGGACG TCACGCCATG
CCAGCAGGGG ACTCCGCCGC GCAGGAGCAG AGCCGACAGC TCGCGCTCGC CGCCGCGCAC
GAACGCGCCG CGGCGGACGC ACGCGCCACG GCGTCGCGCT ACGGCGTGGC GTCCGCGACC
GAGCAGCGCA CGGCCGCGGC ACTCGCGCCG CTCGCCGCCG CCGGCTACCA CCTGCTGGCC
GACCGTCGCT GGCCGGGCAG TCGTCGCGCG CAGGTCGACA TGGTCGTCGT CGGCCCCGCC
GGCGTGTTCA TCGTCGACAC CAAGGCCTGG GCGGACGTCC GCATGGCCGA GGACCGCATC
TTCCGCGGCC AGGAGGACGT CACCGACGAG CTCATGGCGC TGGCCGACCT CGCCTACCGC
ACCGAGGGTG AGCTCGTCGA GGTCGGGCTC GCGCCCGGCG AGGTCCACGC CGTCGCCGTG
CTGGCGGGGC GCTCCGGGGT CGACGAGCGC GTCGGACCCG TGCGCGTCCT GGGGGACCGC
GACGTGCTGC GGCAGATCGC CCGCCGCGGC GCGCGCCTGG GCCAGGAGCA GGTGGACGCG
GTCCTCGCGC GGTGCCTGTC GTGGTTCACG CACGTCGACG CAGCGGCGCC GATCAGCACG
ACGCTGCCCG AGCCCGTCCT GCCCGGACCG CGCGGCCCCG TCCTGCTGGC ACCCGACGAG
GACGGCGCGC CCGACACGGT CGTGCCCGAG CCGCGTCCCG CCCCGGACCT CCCGACGCCG
CTGCTCAGCG AGGGTGAGGT GCAGCGCGCC ATGCTCGAGG GGCTCATGGC CGAGCCCGTC
GAGGAGTGGA TGTCGTTCCT GCACCCCGCA CAGGCGCGCG TGGTCCGGCG CAGCTACAAC
GGCCCGGCGC GCATCCGCGG GGCGGCGGGC ACCGGCAAGA CCGTCGTCGG CCTGCACCGC
GCCGCCTACC TCGCGCGCAC GCAGCAGGGC AAGGTCCTGG TCACCACGTA CATCCGCACG
CTGCCCGACG TGCTGCGCCA GCAGCTCACG CGTCTCGCGC CGGACGTCGT CGACCGCGTC
GAGTTCGCCG GCGTCCACGA GACCGCCAAG CGGATCCTCG ACGAGCGCGG CGTGAGCGTA
CGCATCGACG GCAAGCAGAT CGCGTCCGCG TGGACCGCCG CGTGGGGCAG GGTGGCCGGT
GGCAGTGCGA TCGACACCGA CCGGCACGAG CAGGAGTACT GGCACGACGA GGTCAGCTAC
GTCATCAAGG GCCGCGGTCT GACCCGCTGG GAGGAGTACG CGGCGCTGCC GCGCCTGGGC
CGCCGGCACC GGCTGGGCAT GCAGCAGCGA CGGGTCGTGT GGGACCTGTA CGAGGCGTAC
GACAAGGAGC TGCGGGACCG CGGCGTGCAC GACTTCGCCG ACCAGATCGC GCTCGCCGAG
GCCGAGCTGC GGCGCGAGCC CCTGGCCGAG CGGTACACCG CCGTGGTGGT CGACGAGGCG
CAGGACCTCA CGTGCGTCAT GATCCGCATG CTGCACGCGC TGGTGGGCGA CGCGCCCGAC
GGGTTCACGC TCATCGGCGA CGGGCAGCAG ACGATCTACC CGGGCGGCTT CACGCTCGCC
GAGGCGGGCG TCTCCGTCGC GGGCCGCGGC ACCGTGCTCG ACGTCAACTA CCGCAACACC
CGCGAGATCC TGCAGTTCGC GTCCCTGCTG GTGAAGGACG ACGAGTACGC GGACATCGAG
GGCGCGACCG CGCGCGGCGA CCGGCCCACC GAGGTGCCGC GCCGCGGCCC GAAACCGGTG
TACGTGCGGT GCCAGAACGA GGCCGACCGG CAGCGTCGCA TGGTCCTGCG CGTGCACGAG
GTCGTCGCCG AGGTCGGCAC CAACTTCGGG GACGTGGGTG TGCTGTCGCT CTCGCGACGC
GGCGTGGAGT CGGCCACCGA GGCGCTGAAG AAGGCGGGCG TGCCCGTCGT CAACCTCGAG
CAGTACGACG GCGTGCCCGT GAACCGCGTG AAGGTCGGCA CGATCAAGCG CGCCAAGGGC
CTGGAGTTCA AGCAGGTGCT GGTCGTCGAC CCGTTCGCGT CGTGGCTCAC CGAGAAGGCC
GAGGAGCTCG ACGAGGTCGA CCGCGAGCGC CGCGAGTTCC GCCTGCGCGA GCTGTACGTC
GCGATGACGC GTGCGCGGGA CGGCCTGTGG GTCGCGTCGA TCTGA
|
|---|
| Protein sequence | MDARFPADRE ESDREGRHAM PAGDSAAQEQ SRQLALAAAH ERAAADARAT ASRYGVASAT
EQRTAAALAP LAAAGYHLLA DRRWPGSRRA QVDMVVVGPA GVFIVDTKAW ADVRMAEDRI
FRGQEDVTDE LMALADLAYR TEGELVEVGL APGEVHAVAV LAGRSGVDER VGPVRVLGDR
DVLRQIARRG ARLGQEQVDA VLARCLSWFT HVDAAAPIST TLPEPVLPGP RGPVLLAPDE
DGAPDTVVPE PRPAPDLPTP LLSEGEVQRA MLEGLMAEPV EEWMSFLHPA QARVVRRSYN
GPARIRGAAG TGKTVVGLHR AAYLARTQQG KVLVTTYIRT LPDVLRQQLT RLAPDVVDRV
EFAGVHETAK RILDERGVSV RIDGKQIASA WTAAWGRVAG GSAIDTDRHE QEYWHDEVSY
VIKGRGLTRW EEYAALPRLG RRHRLGMQQR RVVWDLYEAY DKELRDRGVH DFADQIALAE
AELRREPLAE RYTAVVVDEA QDLTCVMIRM LHALVGDAPD GFTLIGDGQQ TIYPGGFTLA
EAGVSVAGRG TVLDVNYRNT REILQFASLL VKDDEYADIE GATARGDRPT EVPRRGPKPV
YVRCQNEADR QRRMVLRVHE VVAEVGTNFG DVGVLSLSRR GVESATEALK KAGVPVVNLE
QYDGVPVNRV KVGTIKRAKG LEFKQVLVVD PFASWLTEKA EELDEVDRER REFRLRELYV
AMTRARDGLW VASI
|
|---|
| |