| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_3364 |
|---|
| Symbol | |
|---|
| ID | 9147280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 3738535 |
|---|
| End bp | 3739500 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003638442 |
|---|
| Protein GI | 296131192 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0969949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00558819 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGA CGCGGACGAC CGCTGCACCC GGTCGCCGCG AGGTCGTCGC GACTGCGTCG
ACCAGCCTCG AGGCCAGGCG CCGCGCCCTC AAGGCGCGGC GCCTGCGCCG GGGCTGGGCC
GCTCTCGGCC TCGTGGTCCC GGCTGCCTTC TTCTACGTGG TGTTCGTGCT GCGCCCGCTG
GCCCTCACGG TGCAGTACTC GCTCTACGAC TGGAACGGTG TGGGCGCCTC GACGTTCGTC
GGGGTCGACA ACTACACCCG GCTCGTCGAG CAGCCCGAGC TGCTCGGCTC GACCGTCAAC
GCGCTCGAGC TGATCATCTA CTTCAGCTTC GTCCCGGTGA TCCTCGGCCT GCTCACCGCG
GCCACGATCC GCAAGTTCGC GGCGAGCCGG CTCGCGCTGG CCGCGCGCAC GGTGCTGTTC
CTCCCGCAGG TCATCCCGCT CGTCGCCGCG GGCATCATGT GGACGTGGCT GCTCGCCACG
GACGGCCTGG TCAACGAGCT GATGCGGATG CTCGGCCTGG GCTCGGTGAC GCGCGCCTGG
CTGGGTGACA CCAGTACCGC GCTGGGCGCC GTCGGCGTCA TCGGCGCGTG GGTCGCCCTC
GGCCTGTGCC TCCTGCTGCT GCTGTCCGGC ATGACGAAGA TCGACCCGGC GCTGTACGAG
GCCGCGCGCA TCGACGGCGC CGGCGCGGTC CGCGAGTTCT TCGCGATCAC CCTGCCGAGC
GTGCGTCAGG AGATCGGCGT GTGCGTCACC GTCACCGTCA TCGCCGCGCT CGCCGCGTTC
GACATCGTCT ACATCTCCAC GCAGGGCGGC CCCGCGAACT CCACGCTCGT GCCCGGCCTG
GAGATCTACT ACCTCGGCTT CTTCTCCCGC GAGGTCGGCC AGGCGTCCGC ACTGGCCGTG
GTCTTCATGG TCCTCGTGCT GGCCGTGGTC CTGCCGATCC AGCGCCTGAC GAAGGAGGAG
GACTGA
|
|---|
| Protein sequence | MNATRTTAAP GRREVVATAS TSLEARRRAL KARRLRRGWA ALGLVVPAAF FYVVFVLRPL
ALTVQYSLYD WNGVGASTFV GVDNYTRLVE QPELLGSTVN ALELIIYFSF VPVILGLLTA
ATIRKFAASR LALAARTVLF LPQVIPLVAA GIMWTWLLAT DGLVNELMRM LGLGSVTRAW
LGDTSTALGA VGVIGAWVAL GLCLLLLLSG MTKIDPALYE AARIDGAGAV REFFAITLPS
VRQEIGVCVT VTVIAALAAF DIVYISTQGG PANSTLVPGL EIYYLGFFSR EVGQASALAV
VFMVLVLAVV LPIQRLTKEE D
|
|---|
| |