| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_3350 |
|---|
| Symbol | |
|---|
| ID | 9147266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 3724649 |
|---|
| End bp | 3726883 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | glycosyl hydrolase 92 |
|---|
| Protein accession | YP_003638428 |
|---|
| Protein GI | 296131178 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.834613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00122332 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACC ACGTCGACCC GTTCATCGGC ACCGAGGCGA CCGACCTGCC CGAGCCGTCC
GGCCTGGCGG CGACGTGGTG GTGGCCCAAG CCGCAGGTCG GCAACACGCA CCCGGGCGCG
ACGTACCCGT TCGGCATGGT GTCGGCGTGC GCGTACTCCG GGGCGTACCC GACGGGCTAC
GGACGGTACG ACCTGTCGAC CGAGGGCCGC CCGCCGGTGC TGCACGACCG GCTCGTCGCG
ACCGGCTTCA CGCACTTCCA GCAGTCGGGC ACGGGCGCGA TCCGCAAGTA CTACAACTAC
TTCCGGGTGA CGCCGATGCT GGGCCCGCTG GACGACCTGG ACTGGCCGTG GGAGATCGTC
GACGAGGTCG CCGAGCCGGG CTACTACGCC GCCACCCTGG AGTCGGGCAT CCGCGCCGAG
ATCACCGTGG GGCCGAAGTC CGCGGTGCAC CGGTACACGT TCCCCGCGCA CCACGACGCG
CGGCTCGTCA TCGACTTCTC CCTGGGCGGC CTCGACATCC CGTACGGGCG GACCGTGCCG
CTGCGCGCGC ACCTGGGGAC CGTCAACCCC GGCTGCGCGG AGGGTGAGAT CGTCGTCGAG
GGCGCCCCAC TGGCCGCGCG CGTCGAGTGC GACGCGCAGC ACTGGCGGCA GATGCTCTGG
TACGACCGCC GCCTCATGCC CGGCGGCACG CGCCTGGACT TCGACCGTAT CCGCCCCACG
ACGCTGCGGC CCTTCGGTCT CATGTGGGCG GGCCCGACCG AGCCCGGGCA GGTCGTCGAG
CTGCGCTTCG GGTTCTCGCT GCGGGGCGTC GAGCAGGCCG CGCGGACCCT GGAGCGCGAG
TGCGGGCCGG ACCCGCGGCA CTCCTTCGAG CGCCGACGCG CCACGACGCA GGCCGTGTGG
CGCGAGCACC TCGGCAAGGT GCAGGTCGAC GCGCCGACGC CCGAGAAGGC GACCGTCTTC
GGCACCGCGC TGTACCACTC GCTCATCAAG CCGTGCCTGG CCCCCGACGA GTCGCCGTTC
TGGCCCACGC CCGGGCCGTT CGCGTTCGAC CTGTCGACGA TGTGGGACAT CTACCGCACG
CACCTGCCGC TCATGACGGC GCTCGTCCCG GACAGGTCCG TCGAGCTCGC GAACGCGCTG
CTGCAGATCG CCGAGGAGGA GGGCAACCTG CCGATCGGCT ACCGCATGGC GCGCGGCGCG
GACCGGTTCA GCCGGCAGGG CTCGGCGCTC GCCCACACGT TCCTCGCGGA CCTGTGCGCG
CTGGGCCTGC CCGGTGTCGA CTGGGACTGG GCCCTGGTGC ACATGCACGA CGACCTGCGC
CGCACGTACG GCGAGGAGTT CCTGCTGCAC GGCCGCACCC ACCCCATCAG CCACACCCTC
GACCTGGCGT TCGGGTACTG GTGCACGGCG ATCGTCGCGG GGCGCGTGGG CGACCTGACG
CTCGTCGAGC AGTTCGGCCC GCTGGCCGCG CGGTGGCGCA ACGCGTTCGA CCCCGGCACG
GGCCTTCTCG TCGACTCCAC GTACTACGAG GGCGGGCGGT GGAACTACTC GTTCCGCCTG
CTGCACGACA TGGCGTCGCG CATCGCGCTG GCCGGCGGGG ACGACGAGTT CACGACGATG
CTCGACCAGT TCTTCGGCTT CGGCGCGGAC CCCGTCAAGC AGCCCGGTCT GCACCCCGAC
GTCGACGAGA TGGCCGCCGG GTACGCGCTT CACCGCTTCG AGGGTCTCAA CAACGAGCCC
GACATGGAGG CGCCCTGGGC GTACATGTAC GCGGGCCGCC CGGACCGCAC CGCGCAGGTC
GTCCACGACG TCGTGCAGCA GCAGTTCGGG ACGGGCCGCG GTGGGCTGCC GGGCAACGAC
GACTCCGGCG GGTTGTCGTC CTGGTACGTG TGGGCGACCC TGGGACTCTT CCCCGTCGCG
GGGCAGAACC TGTACCTGCT CAACGCGCCC GCGTGGCGCG AGGCACGCAT CGACGTGGGC
GGCCGGCCGT TCACGATGGA GACGACCGGA TTCGTCGAGC CCGAGCCCGG CGGCCCGGTC
CAGCACGTGC AGTCGGTCCA CCTCGACGGC GTCCCGCTCG ACCGCCCGTT CCTCACCGGC
GGCGAGCTGC ACTCCGGGGG CCGGCTGCTC ATCGGTCTCG GCCCGGAGCC GTCCGGGTGG
GGCACCCAGC ACCGACCACC CAGCGCCCCC GCGCCGCACG TCGACGTCCC GCTCCCCCGC
CTCGCCCGAC CCTGA
|
|---|
| Protein sequence | MFDHVDPFIG TEATDLPEPS GLAATWWWPK PQVGNTHPGA TYPFGMVSAC AYSGAYPTGY
GRYDLSTEGR PPVLHDRLVA TGFTHFQQSG TGAIRKYYNY FRVTPMLGPL DDLDWPWEIV
DEVAEPGYYA ATLESGIRAE ITVGPKSAVH RYTFPAHHDA RLVIDFSLGG LDIPYGRTVP
LRAHLGTVNP GCAEGEIVVE GAPLAARVEC DAQHWRQMLW YDRRLMPGGT RLDFDRIRPT
TLRPFGLMWA GPTEPGQVVE LRFGFSLRGV EQAARTLERE CGPDPRHSFE RRRATTQAVW
REHLGKVQVD APTPEKATVF GTALYHSLIK PCLAPDESPF WPTPGPFAFD LSTMWDIYRT
HLPLMTALVP DRSVELANAL LQIAEEEGNL PIGYRMARGA DRFSRQGSAL AHTFLADLCA
LGLPGVDWDW ALVHMHDDLR RTYGEEFLLH GRTHPISHTL DLAFGYWCTA IVAGRVGDLT
LVEQFGPLAA RWRNAFDPGT GLLVDSTYYE GGRWNYSFRL LHDMASRIAL AGGDDEFTTM
LDQFFGFGAD PVKQPGLHPD VDEMAAGYAL HRFEGLNNEP DMEAPWAYMY AGRPDRTAQV
VHDVVQQQFG TGRGGLPGND DSGGLSSWYV WATLGLFPVA GQNLYLLNAP AWREARIDVG
GRPFTMETTG FVEPEPGGPV QHVQSVHLDG VPLDRPFLTG GELHSGGRLL IGLGPEPSGW
GTQHRPPSAP APHVDVPLPR LARP
|
|---|
| |