| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_3071 |
|---|
| Symbol | |
|---|
| ID | 9146983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 3419454 |
|---|
| End bp | 3419933 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_003638153 |
|---|
| Protein GI | 296130903 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0835816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000247003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGA TCGCCGGACC TGCCGCCGCT GCACCGCACT CCGGGCGCGG GCGCGTCGTC
ATGCAGGTGC GCTGGTCGGA CGTCGACCTG TTCGGGCACG TCAACAACGC GGCGTTCCTG
CGCTACCTCG ACGACGCCCG GTTCACGCTG TTCCCGCGCA TGGGTGTCGA CGAGGTCGGG
GCGATGACGG CGTCGCTGCT GGTCGTCGTC AAGCACGAGA TCGACTACCT CGCGCCCATC
CGGTTCCGGC CCGCGCCCGT CGCGGTGGAG GTGTGGGTGC CGCGCCTGGG CAGCTCGTCG
GTGGACTTCG CGTACGAGGT GCTCGACGGG GACGCGCCGA ACGCGCCGGT GGCACTGCGC
GCCCGCTCGC GCATGGTGCA GCTCGACAGC GCGACGTACC GCCCGCGGCC GTTCACCGAC
GAGGAGCGCG CCGTGTTCGA GGCGTTCCGC GGCGACTCGC CGGAGCTGCG CGGCTGGTGA
|
|---|
| Protein sequence | MDEIAGPAAA APHSGRGRVV MQVRWSDVDL FGHVNNAAFL RYLDDARFTL FPRMGVDEVG
AMTASLLVVV KHEIDYLAPI RFRPAPVAVE VWVPRLGSSS VDFAYEVLDG DAPNAPVALR
ARSRMVQLDS ATYRPRPFTD EERAVFEAFR GDSPELRGW
|
|---|
| |