| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2917 |
|---|
| Symbol | |
|---|
| ID | 9146829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 3229117 |
|---|
| End bp | 3231711 |
|---|
| Gene Length | 2595 bp |
|---|
| Protein Length | 864 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | nitrite reductase (NAD(P)H), large subunit |
|---|
| Protein accession | YP_003637999 |
|---|
| Protein GI | 296130749 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.27206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.374599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAACG ACGTCGTGCA CGGGCCCGGG CGGGTCGTGG TCGTGGGTGC CGGGATGGTG
GCCCACCGGT TCGCCGAGCA GCTGTGCGCG CGCGACGGCG ACTGGACGCT CACCGTCGTG
GGCGACGAGC CGCACCGCCC GTACGACCGC GTCCACCTGT CCGACGTCTT CACCGGCCGC
ACGGCCGAGG ACCTCGTCCT CGCGCCGGAG GTCTGGGACG ACCCCCGCGT CACGCTCGTC
ACGGGTGACC GGGCCGTGCG CCTGGACCGC AGCGCGCAGA CGGTGACGAC GGCCTCGGGC
CGCGTCCTGG CCTACGACCA CCTGGTCCTG GCGACCGGCT CGTGGGCCTG GGTGCCGCGC
GCCGAGGGCA CCGACCTGCC CGGCGTGCTG CGGTACCGCA CCCTCGAGGA CGTGGAGGCC
CTGCGGGCGT GGGTCACCGA GCGCGCGCGG ACCCTCGGGC GGCCCCTGCG CGGCACCGTC
GTCGGCGGGG GAGTGCTGGG GCTGGAGGCC GCGGCGGCCC TGTCGACCCT GGGCGTCGCG
CCCACGGTCG TGGAGTTCGC CGACCGGCTC ATGGCCGTCC AGCTCGACGC GGGCGGCGGC
GAGGCGCTGC GTGTCCTCGT CACCGGACTC GGCGTCGACG TGCGCACGTC GACCGCCGCG
ACGCGGGTCG TCGGCGCAGC CGACGGTGCA GTGGGGGCGC TCGAGCTGTC CGACGGCGAG
GTGCTCGACA CCGACGTCGT CGTCTACTCC ACCGGCGTGC GTCCGCGCGA CCGTCTCGCC
CGCGAGTCGG GCCTGCCGGT CGCCGAGCGC GGCGGCGTGG TCGTGGGCCC GACGTGCCGC
ACGGCGGACC CCGCGGTGTG GGCGATCGGC GAGGTCGCGA GCCATGACGG CGAGTGCGTC
GGCCTGGTCG CGCCCGGCAA CGCCATGGCC GACGTCGTCG TCAACCGGCT GTTCGGCGGG
TGCCGGCTGT ACGAGCGCAG CCCGGACGGG ACCAAGCTCA AGGGCGTCGG CGTCGACGCG
GCCGCGTTCG GCGACGTCCT CGGGCTGACA CCGGGCGCGT TGGAGGTGAC GTTCGCGGAC
CCCGTCGCCC GCACGTACCG CAAGCTCGTC GTCTCGGACG ACGCGCGCGT CCTGCTCGGC
GGGGTCCTCG TCGGCGACAT CGAGCTCTAC GCGCAGCTGC GGCCCCTGCT CGGACGTCCG
CTGGGAGCCG ACCCCTCGGC GTACCTCGCG CCGACGGGCG GTGCAGGGCC GGTCCGCAGC
GACCTGCCCG ACGACGTCGT CCTGTGCTCG TGCGCCAACG TCTCCGTCGG TGCCGTCCGG
GCGGCCGTCA CCGAGCACGG CTGCCGCAGC GTGGGCGACG TCAAGGCGAG CACGCGCGCC
GGCACGGTCT GCGGGTCGTG CGTCCCGCTG CTGACGACCG TCGTGAACAG CACGCTGGAG
ACGTCCGGCT TCACGGTCTC GACGGCGATG TGCGAGCACT TCGCGACGTC CCGGGCCGAG
CTCTACGCCC TCGTGCGCGC CGAGGGGCTG CGTACGTTCA CCGAGGTCGT CGCGCGGCAC
GGCCGCGGGC GCGGCTGCGC CGTGTGCCGC CCGGTGGTCG CGTCCATCCT GTCGTCGCTC
GGCATCGGGC ACGTCCTGCA GCCCGACCAG GCCTCGCTGC AGGACACCAA CGACCACCTG
CTGGCGAACC TGCAGAAGGA CGGCACGTAC TCCGTGGTGC CGCGCATGCC CGGTGGTGAG
GTCACCCCCG AGAAGCTCCT GGTGCTCGCA CAGGTGGCGC AGGAGTTCGG GCTGTTCACG
CGCGTCACCG GCGCGCAGCG CATCGGCATG TTCGGCGCCC GGCAGGACCA GCTGCCGGCC
ATCTGGCGGC GCCTGGTCGA CGCGGGGTTC GAGTCGGGCC AGGCCTACGG CAAGTCCCTG
CGAGCGGTGA AGACGTGCGT CGGGCAGGCG TGGTGCCGGT TCGGCGTGCA GGACTCGTCG
TCGATGGCCG TGCGGCTCGA GCTGCGGTAC CGCGGTCTGC GTGCGCCGCA CAAGTTCAAG
GTCGGGGTGT CCGGGTGCGC ACGTGAGTGC GCCGAGGCCC GCGGCAAGGA CGTCGGGGTG
ATCGCGACCG AGAAGGGCTG GAACGTGTAC GTGGGCGGCA ACGGGGGTTT CACGCCGCGG
CACGCCGAGC TGCTCGCCGA GGACCTCGAC GACGACCGTC TCGTGCAGGT GGTCGACCGC
TTCCTCGCGC TGTACATCCG CAGCGCCGAC CGGCTGCAGC GGACCGCGCC GTGGGTGGCG
GCGTTCCCGG GGGGCGTGGC GGAGCTGCGG CGTGTCGTGG TCGAGGACTC CCGGGGCCTC
GGCGCCGAGC TCGACGCGGA GGTCGAACGG CACGTCGCGG GGTACGTCGA CGAGTGGCGC
GCGACCCTCG AGGACCCCGG GAAGCTGCGC GCGTTCATAC CCTACGTCAA CGCCCCGGAC
CGGTCGGACC CGGACCTGTC CTACGTGCCG GAACGTGGTC AGGCCCGCCC TGCACGTCCC
GGGGAGCGCG GTCACCCCGA TCTCCTGAGC GCCCGTGCCG CCGGCGCCAC GACCCTCCAG
GAGGACGCGC CATGA
|
|---|
| Protein sequence | MRNDVVHGPG RVVVVGAGMV AHRFAEQLCA RDGDWTLTVV GDEPHRPYDR VHLSDVFTGR
TAEDLVLAPE VWDDPRVTLV TGDRAVRLDR SAQTVTTASG RVLAYDHLVL ATGSWAWVPR
AEGTDLPGVL RYRTLEDVEA LRAWVTERAR TLGRPLRGTV VGGGVLGLEA AAALSTLGVA
PTVVEFADRL MAVQLDAGGG EALRVLVTGL GVDVRTSTAA TRVVGAADGA VGALELSDGE
VLDTDVVVYS TGVRPRDRLA RESGLPVAER GGVVVGPTCR TADPAVWAIG EVASHDGECV
GLVAPGNAMA DVVVNRLFGG CRLYERSPDG TKLKGVGVDA AAFGDVLGLT PGALEVTFAD
PVARTYRKLV VSDDARVLLG GVLVGDIELY AQLRPLLGRP LGADPSAYLA PTGGAGPVRS
DLPDDVVLCS CANVSVGAVR AAVTEHGCRS VGDVKASTRA GTVCGSCVPL LTTVVNSTLE
TSGFTVSTAM CEHFATSRAE LYALVRAEGL RTFTEVVARH GRGRGCAVCR PVVASILSSL
GIGHVLQPDQ ASLQDTNDHL LANLQKDGTY SVVPRMPGGE VTPEKLLVLA QVAQEFGLFT
RVTGAQRIGM FGARQDQLPA IWRRLVDAGF ESGQAYGKSL RAVKTCVGQA WCRFGVQDSS
SMAVRLELRY RGLRAPHKFK VGVSGCAREC AEARGKDVGV IATEKGWNVY VGGNGGFTPR
HAELLAEDLD DDRLVQVVDR FLALYIRSAD RLQRTAPWVA AFPGGVAELR RVVVEDSRGL
GAELDAEVER HVAGYVDEWR ATLEDPGKLR AFIPYVNAPD RSDPDLSYVP ERGQARPARP
GERGHPDLLS ARAAGATTLQ EDAP
|
|---|
| |