| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2913 |
|---|
| Symbol | |
|---|
| ID | 9146825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 3224579 |
|---|
| End bp | 3225988 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | 1, 4-beta cellobiohydrolase |
|---|
| Protein accession | YP_003637995 |
|---|
| Protein GI | 296130745 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.489381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.473063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCCC GCCCGAAGCC GGCGCTCGCC GCCGGTCGCA AGGCCGTCGC GGTGCTCGCC
GCCGGCGCGG TGCTCGCCGC CGGCACGACC GTCCTGGCCT CCACCGCGGC GAACGCCGCC
GCCGGCTGCC GCGTCGACTA CGCGGTCACC AACGAGTGGC CCGGCGGTTT CGGCGCCAGC
ATCAACGTCA CGAACCTCGG CGACCCGCTG TCGTCGTGGG ACCTGCGCTG GACGTTCCCC
AGCGGCCAGT CGATCCAGCA GCTCTGGAAC GGCGCGGCCT CGTCGAGCGG CTCGCAGGTC
ACGGTCGTGA ACTCCCCGTG GAACGGCTCG GTCGGCACCA ACGGCGTCAT CTCGCTCGGG
TTCAACGGCT CGTGGAACGG CTCGAACGCC AAGCCCACGT CGTTCACGCT CAACGGCACG
GCGTGCACCG GTTCGGTGTC CGGCGGCCAG CCGACCCAGC AGCCGACCCA GCAGCCGACG
CAGCAGCCCA CCCAGCAGCC GACGCAGCAG CCCACCCAGC AGCCGACGCA GCAGCCCACC
CAGCAGCCCA CCCAGCAGCC GCAGCCCAGC GGCGACTTCT ACGTCGACCC CGAGACGGCG
GCCTACGCCG CCTGGCAGGC CGCGTCGGGC AACGACAAGG TGCTGCTGGC GAAGATCGCG
CAGACGCCGC AGGCGCTGTG GATCGGCGAC TGGTCCAGCG CGTCCGTCAT CCAGCAGCAG
GTCCGCGACT ACACCGGCAA GGCGCGTTCC GCCGGCAAGA TCGCGCAGAT CGTCGTGTAC
GCCATCCCGG GCCGTGACTG CGGCAACTAC TCGGGCGGCG GCGTCGCCAC CTCGGAGTAC
GCGCGCTGGG TCGACACCGT CGCGCAGGGC GTCCAGGGCA ACCCGTGGGT GATCCTCGAG
CCCGACGCGC TCGCGCAGCT CGGCGACTGC CAGGGCCAGG GCGACCGGGT CGGCTTCCTG
CAGTACGCGG CCAAGGCGTT CGCCGCCAAG GGTGCGCGCG TGTACATCGA CGCCGGCAAC
TCGGCGTGGC TCTCCGCGTC GGAGGCGGCC AACCGCCTCA ACCGCGTCGG CTGGGACGGT
GCCGTCGGCT TCTCGCTCAA CGTCTCCAAC TACCGCACGA CGGCCGAGGC CAAGGCGTAC
GGCCAGGAGA TCTCCCGCCT CACCGGTGGC AAGAAGTTCG TCATCGACAC GTCGCGGAAC
GGCAACGGCG CGTCGGGCTC CGAGTGGTGC AACCCGAGCG GGCGCGCCCT GGGCGACCGC
CCGACCCGCG TCAACGACGG CAGCGGGCTC GACGCGCTGC TGTGGATCAA GCGTCCCGGC
GAGTCGGACG GCACCTGCAA CGGCGGCCCG GCGGCCGGCG CCTGGTGGCA GTCGATGGCC
CTGGAGCTCG CGCGCAACGC CAAGTGGTGA
|
|---|
| Protein sequence | MSPRPKPALA AGRKAVAVLA AGAVLAAGTT VLASTAANAA AGCRVDYAVT NEWPGGFGAS
INVTNLGDPL SSWDLRWTFP SGQSIQQLWN GAASSSGSQV TVVNSPWNGS VGTNGVISLG
FNGSWNGSNA KPTSFTLNGT ACTGSVSGGQ PTQQPTQQPT QQPTQQPTQQ PTQQPTQQPT
QQPTQQPQPS GDFYVDPETA AYAAWQAASG NDKVLLAKIA QTPQALWIGD WSSASVIQQQ
VRDYTGKARS AGKIAQIVVY AIPGRDCGNY SGGGVATSEY ARWVDTVAQG VQGNPWVILE
PDALAQLGDC QGQGDRVGFL QYAAKAFAAK GARVYIDAGN SAWLSASEAA NRLNRVGWDG
AVGFSLNVSN YRTTAEAKAY GQEISRLTGG KKFVIDTSRN GNGASGSEWC NPSGRALGDR
PTRVNDGSGL DALLWIKRPG ESDGTCNGGP AAGAWWQSMA LELARNAKW
|
|---|
| |