Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_2821 |
Symbol | |
ID | 9146729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 3138457 |
End bp | 3140091 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003637905 |
Protein GI | 296130655 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00501587 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGACCGACC CCCGCACACC CGTCGACGAC GCCGCCGTCG ACACCCCCGC CGACGCACCC CCGGCCGCGC CGGCGATGAC CCACCGCGAG GTCCTCGAGG CCCTGTCCGG GATCCTCCTG GGGATGTTCG TCTCGATCCT CGCGACGAGC GTCGTGTCGA CGTCCCTGCC GCGCATCATC ACCGACCTCG GCGGGAGCCA GTCCGCGTTC ACGTGGGTCG TCACCGCGAC CCTCCTCACC ACCACGGTCT CCACACCCGT CTGGGGCAAG CTCGCGGACC TCGTCGACCG CAAGCTGCTC GTCCAGCTCG CGCTCGCGAT CTCGGTCGTC TCCTCGGCCC TGGCCGGCCT CGCCCACAGC ACCGAGATGC TCATCGGCAT GCGCGCCCTG CAGGGCGTCG GCGCCGGCGG TCTCACCGCG CTGGGCACCG TGCTGCTCGC CGACATCATC AGCCCGCGCG ACCGCGGCCG GTACATGGGT CTCATGGGCG CCGTCATGGC CGTCGGCATG GTCGGCGGGC CGCTGCTGGG TGGTGTCATC ACCGACGCCG CCGGCTGGCG GTGGAACTTC TTCGTCGGGC TGCCGTTCGC CGTCGCCGCG ATCGTCGTGC TGCAGCGCAC GCTGCACCTG CCGGGCCTCG CCGGCCGGCG CGTGCGGATC GACTGGACCG GCACGGCCCT GCTCTCGGCG TCCGTCGCGA CGCTCCTGCT GTGGGTCACG TTCGCCGGCT CGTCGTTCGC GTGGCTGTCG TGGCAGACCG CCGCCATGGT CGGCGGCGCG GCCCTCGGCG TCATCGCCCT GGTCCTCGTC GAGCAGCGTG CGTCCGAGCC CATCATCCCG CTGCACCTGT TCCGCAACCG CACCGTGGTG CTCACGGTGG TCGCGTCCGT CGCCGTCGGC ATCGCGCTGT TCGGCACGCA GGTGTTCCTC AGCCAGTACA TGCAGCTGGC GCGCGGCACG ACGCCCACCG AGTCCGGTCT GCTCACCGTC CCCATGGTCG TCGGCACGTT CCTGGCCTCG ACCGTCTCGG GCCGCGCGAT CTCCCGCACC GGGCGCTACA AGGCGGTCAT GGTCGTCGGC GCGGTGCTGC TGACCGCGGG CCTGGCCCTC ATGGGCTCGA TCGACGAGAC GACGAGCTTC ACGCTCGTCG GCCTGTACAT GCTCGTCGTC GGCTCGGGCG TCGGCATGCT CATGCAGAAC CTCGTGCTCG CGACGCAGAA CACCCTGCCC GTCACGGACA TGGGCGCGGG CACCGCGACC GTCGCGTTCT TCCGCACGCT CGGCGGCGCG ATCGGTGTCT CGGCGCTCGG CGCCGTGCTG GCCCACCGCG TGCAGCACCT CATGGTCGAC GGGCTCACGG AGCTCGGCGT GCCGGCCTCG GCGCTCGGCT CGGGCGGCGT CGGCGCCCTG CCCGACCTCG CGACCCTGCC CGGCCCGGTC CGGTCCGTCG TCGAGCACGC CTTCGGCGTC GGCGTGGCCG AGCTGTTCCT CATCGGCGCC CCGGTCGCGC TGCTCGCGCT GGTCGCGGTG CTCGCGCTGC GCGAGGTGCC GCTGGGCCGT GCGTCGGGCG TCGAGCAGCG GCTCGCGCAG GCCGCGAGCC AGGCGGGGAC GCCGACCGCG GCCGCCCGCG GCTGA
|
Protein sequence | MTDPRTPVDD AAVDTPADAP PAAPAMTHRE VLEALSGILL GMFVSILATS VVSTSLPRII TDLGGSQSAF TWVVTATLLT TTVSTPVWGK LADLVDRKLL VQLALAISVV SSALAGLAHS TEMLIGMRAL QGVGAGGLTA LGTVLLADII SPRDRGRYMG LMGAVMAVGM VGGPLLGGVI TDAAGWRWNF FVGLPFAVAA IVVLQRTLHL PGLAGRRVRI DWTGTALLSA SVATLLLWVT FAGSSFAWLS WQTAAMVGGA ALGVIALVLV EQRASEPIIP LHLFRNRTVV LTVVASVAVG IALFGTQVFL SQYMQLARGT TPTESGLLTV PMVVGTFLAS TVSGRAISRT GRYKAVMVVG AVLLTAGLAL MGSIDETTSF TLVGLYMLVV GSGVGMLMQN LVLATQNTLP VTDMGAGTAT VAFFRTLGGA IGVSALGAVL AHRVQHLMVD GLTELGVPAS ALGSGGVGAL PDLATLPGPV RSVVEHAFGV GVAELFLIGA PVALLALVAV LALREVPLGR ASGVEQRLAQ AASQAGTPTA AARG
|
| |