| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2567 |
|---|
| Symbol | |
|---|
| ID | 9146471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 2874563 |
|---|
| End bp | 2875972 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_003637654 |
|---|
| Protein GI | 296130404 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.368822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGG GGTTCGGGGA CTGGGGCGCG TCGCGCGCCG CGGACGTGGA CGCCGCGCTG
CCGCTGACGG GCCGCAACGA GCTCGACGAG GGGCTCGTCT CGACCTTCAA GGGCAAGCTC
CTCGACGAGG TCGACCTGCA CGAGCTCGGC AAGCTCGACG CCGCGCAGCG GCGCATCCGC
CTCGAGCGCG TCGTCGCGCA CCTGGTCTCC GCCGAGGGCG TCATCCTCAC GACGCGCGAG
CGCAACGCCC TCGTCCGGCG CGTCGTCGAC GAGTCCATCG GCCTGGGCGT GCTCGAGCCG
CTGCTCGCCG ACGAGACCGT CTCCGAGATC ATGATCAACG GCCCGTCGAC CATCTACGTC
GAGCGGTACG GCCAGGTCGA GCGCGTCCAG ACGGCGTTCG CGTCCGAGGA GCAGCTGCTC
CAGACGATCG ACCGGATCGT GTCGACCGTG AACCGGCGCG TCGACGAGTC CAGCCCCATG
GTCGACGCGC GCCTGCCCGC CGACGAGCGC ATGCCGCGAG GCGCCCGCGT GCACGTGATC
CTGCCGCCGC TCGTGCTCAA CGGTCCGACC GTGACGATCC GACTCTTCCC CAAGTCGTAC
GGCCTCGAGG AGCTGCTCAA CCGCGGCAGC CTCGACGCCC CGACGTCCGA GCTGCTCGCC
GCGTGCGTGC GCGCGCGCAT GAACATCATC GTCTCGGGCG GTACGTCGTC GGGGAAGACG
ACGATGCTGA ACGCGCTGTC GGCGTTCATC CAGGGCCGCC AGCGCATCAT CACGATCGAG
GACGCGGCCG AGCTGTCGCT CTCCCAGGAG CACGTCGTGC GCCTGGAGAC CCGCCCCGCG
AACGTCGAGG GCCACGGTCA GGTCACCATC CGTGAGCTCG TCCGCAACGC CCTCAGAATG
CGCCCCGACC GCATCATCGT CGGCGAGGTC CGCGGCGGTG AGGCCCTCGA CATGCTGCAG
GCGATGAACA CCGGCCACGA GGGCTCGCTC GCCACCGTGC ACGCCAACAG CACCGTCGAC
GCGCTCATCA GGCTCGAGAC CCTCGCGTCG ATGAGCGAGG TCGACGTCCC GTTCCACGCG
CTGCGTGACC AGGTGAACAA CGCCGTCGAC ATCGTCGTGC AGCTGCTGCG CGGCTCCGAC
GGGACGCGTC GCGTCACGGA GGTCGGCTGG GTCGCGTCGC GGCACCGGGA GGACTTCCGC
GTCGAGCCGA TCATGCGCTG GGACCCCGAG GTGCCGAACG GCTCGGGCCC GCCCGGGCGG
TTCGTGCGGT ACCCGATCCC GCGTCCGCTG GTCGACAGGC TCCGCATCGC GGGCGAGGCG
ATCGGCAAGC AGGCGACCCG TCCCCACGTG GTGCCGGGAT CCGCAGCAGC GCAGGGCGCC
GTCGCCGGCG CCGAGGAGGA GTCCGCATGA
|
|---|
| Protein sequence | MSGGFGDWGA SRAADVDAAL PLTGRNELDE GLVSTFKGKL LDEVDLHELG KLDAAQRRIR
LERVVAHLVS AEGVILTTRE RNALVRRVVD ESIGLGVLEP LLADETVSEI MINGPSTIYV
ERYGQVERVQ TAFASEEQLL QTIDRIVSTV NRRVDESSPM VDARLPADER MPRGARVHVI
LPPLVLNGPT VTIRLFPKSY GLEELLNRGS LDAPTSELLA ACVRARMNII VSGGTSSGKT
TMLNALSAFI QGRQRIITIE DAAELSLSQE HVVRLETRPA NVEGHGQVTI RELVRNALRM
RPDRIIVGEV RGGEALDMLQ AMNTGHEGSL ATVHANSTVD ALIRLETLAS MSEVDVPFHA
LRDQVNNAVD IVVQLLRGSD GTRRVTEVGW VASRHREDFR VEPIMRWDPE VPNGSGPPGR
FVRYPIPRPL VDRLRIAGEA IGKQATRPHV VPGSAAAQGA VAGAEEESA
|
|---|
| |