| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2419 |
|---|
| Symbol | |
|---|
| ID | 9146322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 2708201 |
|---|
| End bp | 2709109 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 81% |
|---|
| IMG OID | |
|---|
| Product | AlkA domain protein |
|---|
| Protein accession | YP_003637508 |
|---|
| Protein GI | 296130258 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.839778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00593166 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCGCACCG CCCTCGACCA CCGCGCCGCG CTGTCCTCCC TCGCGGCCCG GTCGGTGCCG
GGCGTCGAGC GGGTCGACGT CGACGCCGGC ACCGTCAGCC GGCTCGTCGA GCTCGGCGCC
GGGCCCGTGC ACGTCACGGC GCACGTGGCA GCGACCGGTG TGCGCGTCGA CGCCGACGGG
CCGGCCGCCC CCGCTGCGCT CGACGACCTC GCGACGCGGT GGTTCGGGCT GGCCGACGAC
CTCGCACCCG TGCACGCCGC CCTCGGTGGC GACCCCGTCC TCGGCCCGCT CGTCGCGGCC
CGCCCCCACC TGCGCGTCCC GGGGCATCCC GACGGCTTCG AGGCCGCGGT CCAGGTCGTG
CTGACGCAGC AGGTCTCGCT GGGCGCCGGG CGGACGACCG GTGCGCGGCT CGCCTCCGCG
TACGGCCGGC CCGGCCCCGG CGGGTTGCTC GCGTACCCAC GCCCCGAGGA CCTCGCCGCG
GCCGACTCCG TGGCCCTGCA GGCGGTGCTG CGCGTGCCGC ACGCACGCGC CCGCGCGGTC
CACGCGCTCG CCGTCGCCTG CGCGGGGGGC CTGCGGCTCG TGCCCGGCGC CCCTGCCGCC
GACGTCCGCG CAGCGCTGCT GGCGATCCCC GGCATCGGCC CGTGGACCGC GGACGTCGTG
GCGCTGCGCG CGCTCGGGGA CCGCGACGCG TTCCCCGCGG GCGACCTCGT CCTGCGCCGC
GCCCTGGGGG TGCCGGACGT CCGCGACGTC GCGACGGCCG GGCGGGCGTG GTCGCCGTGG
CGGGCCTTCG CCGCGACGCA CCTGTGGGCG GCGGTCGGGT ACCCCGCTGC GGCGACGGCT
CCCCCGGACG GGCGCGCGCA GCGGACCCGT CCGGGTGGTC CCGGCATCGG CCCGAGCGCG
ATCCGGTGA
|
|---|
| Protein sequence | MRTALDHRAA LSSLAARSVP GVERVDVDAG TVSRLVELGA GPVHVTAHVA ATGVRVDADG
PAAPAALDDL ATRWFGLADD LAPVHAALGG DPVLGPLVAA RPHLRVPGHP DGFEAAVQVV
LTQQVSLGAG RTTGARLASA YGRPGPGGLL AYPRPEDLAA ADSVALQAVL RVPHARARAV
HALAVACAGG LRLVPGAPAA DVRAALLAIP GIGPWTADVV ALRALGDRDA FPAGDLVLRR
ALGVPDVRDV ATAGRAWSPW RAFAATHLWA AVGYPAAATA PPDGRAQRTR PGGPGIGPSA
IR
|
|---|
| |