| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2346 |
|---|
| Symbol | |
|---|
| ID | 9146249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 2619107 |
|---|
| End bp | 2622697 |
|---|
| Gene Length | 3591 bp |
|---|
| Protein Length | 1196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003637435 |
|---|
| Protein GI | 296130185 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.236845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000172862 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA CGCTGTCCTC CGTGGACCCC ATCACCACCG CCGCGGTACC GGTGACGACG
CCGGTGACCG CGGTCGTGGT GACCCGAGGG CGCACCCGGT ACCTCCCGGT GACGCTCCGC
GCGCTCGCAG CCCAGACCCG CCACCCGCTG CGGGTGCTCG TCGTCGACGT CGCCGGCGTC
GACGAGAAGG TCGGCACCCT CGTCGACGAG GCCTTCGTCG GCGCCGGGCA CCCCGTGCCG
CGACTGTCCA CGGTGCGCGT GCCGCGGGCC AGGACGTTCG GCGAGGCGGT GCGCGGCGGT
CTCGACGTGC TCTCGCAGGC GCTCGACGAG CGCCCGACGA CCTGGTTGTG GCTGCTCCAC
GACGACAGCG CCCCGGCGCC GGACGCGCTC GGACGGCTCG TGCGCACGGT GTCGAACGCG
CCGTCGGTGG CCGTCGCCGG CTGCAAGCAG CGCACCTGGA CCGATCCCGA GCGGCTGCTC
GAGGTGGGCG TCCGCACGAC CCGCTCCGGG CGCCGGATGA CCGACATCGA GCCCGGCGAG
CTGGACCAGG GTCAGCACGA CGGGCGGACG GACGTGCTGG GCGTCGGGCT CGCCGGGGCG
CTCGTGCGCC GCGACGTGTG GGACGCGCTC GGCGGCACCG ACCCCGCGCT GGGACCGTAC
GGCGACGGGC TCGACCTCTC GCGGCGGGCA CGCCTCGCCG GCCACCGCGT CGTCGTCGTG
CCCGACGCCG TCGTGCGCCA CGCGCAGGCC GCCTACCACG GGCTGCGTCC GGCGCGGGGC
GGACCCTCGC GCCGTCAGGA CGCCCCGGTC GTCGACCTCG ACGGTGACGG CGAGCCCGAC
AGCGCCGACC CCACCCGCTC GTTCGCCGGC CGACGGCGCG CGCTGCTGCA CCAGCGGCTG
GTCGGCGCGC CGGCGCCCCT CGTCCCGGTG GTCGTGCTGC TCACGCTCGC GGCCGCCGTG
GTGCGCAGCC TCGGGCAGGT CGCCGCCAAG CACCCGCAGC TCGCCCTCGC CGAGCTGCGC
GTGGCGCTGC TCGTGCTGCT GCGCCCGCGC GACGTCCTGC GGGCACGACG ACGCGTCCGC
GCGACGAGCG TGCTCGCCCG CCGCACGCTG CGCCCGTTGC AGGCGACGTG GCGTGACGTG
TGGCGCCAGG TGCGTGACCG GCGCCTCGCG CGCCTGGAGT CACGCCGCGT GGGCCGCGCG
CCGAGCGAGC TCGAGCTGCG CGAGCTCGCC GCGGTCGCCA CGCGCCGCCG GGTGACGCTG
GTCGTCGTCG TCGCCGTCCT CGTGCTGGTC TGCGCCACCG CGGTCGGCCG GCTCGTCGGC
CCCGTCGCCG CGGGCGCACC CCTCGTGGGC GACGCGCTCG CGCGCGTGAC GACCGGCGTG
GCCGACGTCT GGTCCGCGGC GACGTCCGGG TGGGTGGCCG GAGGGCTCGG CGGTCCCGGG
CCGGCCGACC CGTTCCTCGT CGTCCTCGCA GCCCTGTCCG CCCTGCTCGG TGGCGAGCCG
CGCGCCGCCG TCGGCGTGCT CGTCCTCGGC GGTGCCGTCC TGGCCGGCGT CGGGGCGTGG
GCCGCCGCGG GCGCCGCGAC CCGGTCCGTC CTGGTGCGGG CGTGGGCCGC CCTCGCGTGG
GCGTCCGCGC CCGCGCTGCT GCTCGCCGTC GGTGACGGTC GCGTCGGTGC CGTGGTCGCG
CACGCGGCCC TGCCGTGGGT CGCGCTGGGA CTCGCGCGTG CCGTCGGCGT GCAGCGTGTC
GACCAGGTGC TCTCGGCCGT GGCCACCGCG CGCCGGTCGG AGGACGAGCG TGACCCGGAC
GCCGTCGCCG AGGCGCGTGC GGCGCGTGCC GCCGCCCGTG CCGCCGGCGC GCACGTGACG
GCCCGGGTGC CGACGGACCC GGCCGAGGTC GACGTCGTCA CGCCCGTGCG CGGCGTCGCC
GCCGTGCCCA CCCCACGCGC ACCCGTCTCG GGTGCGGTCC CGGTCACCCC CGCGCCGACC
ACGCGCGACG ACGCGGCGAC GGACGTCCCG GCCCTCGTGG GGGCCCCCGA CCCGACGGGC
TCGGTCGCCG CGGCCGCGGG CGCCGCGCTC GCGCTCGCCG TCGCGGTCGC CGCCGCTCCC
GTGCTGCTCG TCCCCGCCGT CGTGCTCGTC GTCGTCGCGG CGCTCGTCGT ACCGCGCGCG
CGGGTGCGGG TGCTCGGGGT GCTCGTGCCC ACCCTCGTGC TCATGGGCCC GTTCCTCGTC
GAGGTCGGCA GTGCCGGCGC GGCCGGTGTG CGGCTCCTGC TCGCCGACCC CGGACCCGGG
GCGCCCGTGG CGCCCGCGGC GCCGCTCGCA CGCGCGCTGG GCGTGCCCGC GGACCCGGCG
GTGCTCGTCC CCGGCGGGCT GCCGGACGTC CTCGCAGCCG CGTGGCCGTA CCTGCCGGGC
GCCGTCCTGG TCGTGCTCGC GGCGGTCGCG CTGGTGCGGG GAGCGTCGGT CGCGCGCGGC
GTGCGCGTCT GCTGGGTGGC GGCGGCCGCC GGCATCGCGG CCGGGGCGTG CGTCGCCGCC
GCCCCCCTCG CGGTCACGGC CGACACCTGG GCGCCCGCGT GGACGGGTGC GACGGTCTCC
CTGACGACGT TGGGGCTGCT GGGTGCAGCG GTGCTCGGCA GCGACGGTCT CGCGAGCCGG
GTCGCCGAGC GGTCGTTCGG CTGGCGCCAG CCGCTCGTCG CCGTCGCGAC CGTGCTCGCC
GTCGTCAGCG TGCTCTGCGC CATCGGCGGC TGGGCGTGGA CCGCGCGCTC CGGTGAGGCG
CTCGCGCTGC GTGCGTCGAC GACCCCCGTC GTGCCCGTCG TCGGCCAGCA GGGCGCCCGC
TCCGCGAGCT CGTCACGCGT CCTCGCCCTC GGCGTGCGTG CCGACGGCTC GGTGGACTGG
TCGATGCTGC GCGCCGACGG CGACCAGCAC GTCGACCACG CCGCCGCCGG CGCGGCCCGC
GGCGTCACGG GCCCGCTCGA CGCGCCCCGT CCGGCGCCCG CCGACGCGGC GGCCTCCGAG
GTCGGCGCGC TCGCGGCGCG GCTCGTCCAG GGTGCAGCCG GTGACGTCGC CGCGGAGCTG
GGCGTCCTCG GTGTCGGCGA CGTCCTCGTG CCCACGCCGC AGGACGGCTC CGCCGCCGCA
CGCGCACGCC TCGTCGGCGT CCTCGACGCG ACCGCCGGCC TGGAGCGCGT GACGCACGAG
GGTTCCGGGA CGCTGTGGCG CGTGCGGGCG ACGCAGGGCG AGGCGGTCGT GTCGTGGGCC
CGCACGGTGC CCTCGGCCCG CGACGTCGCC GACCCGCTGG CGAGCGCGGT CGCGGTCGCC
GCGCAGGGAC GGACGGTCGA CACCGCCGTC CCGCCCGGTG ACGCCGGGCG TGTGCTCGTG
CTCGCCGAGC GGGCCGACGC GGGGTGGCGT GCGTGGCTCG ACGGCCGGCC GCTGCCGACC
GTCGACGGCG GCTGGCGCCA GGCCTTCGTC CTCGGACCCG ACGCGGGCCG TCTCGAGGTG
CGCCACCACC TGCCCGAGCG CACGCCGTGG CTCGTCGCGC TCGGCCTGAC CACGCTCGTC
ACGGTGCTGC TCGCGGTGCC GCTGCGACGC CGACGGGGGG TACGGGAGTG A
|
|---|
| Protein sequence | MTETLSSVDP ITTAAVPVTT PVTAVVVTRG RTRYLPVTLR ALAAQTRHPL RVLVVDVAGV
DEKVGTLVDE AFVGAGHPVP RLSTVRVPRA RTFGEAVRGG LDVLSQALDE RPTTWLWLLH
DDSAPAPDAL GRLVRTVSNA PSVAVAGCKQ RTWTDPERLL EVGVRTTRSG RRMTDIEPGE
LDQGQHDGRT DVLGVGLAGA LVRRDVWDAL GGTDPALGPY GDGLDLSRRA RLAGHRVVVV
PDAVVRHAQA AYHGLRPARG GPSRRQDAPV VDLDGDGEPD SADPTRSFAG RRRALLHQRL
VGAPAPLVPV VVLLTLAAAV VRSLGQVAAK HPQLALAELR VALLVLLRPR DVLRARRRVR
ATSVLARRTL RPLQATWRDV WRQVRDRRLA RLESRRVGRA PSELELRELA AVATRRRVTL
VVVVAVLVLV CATAVGRLVG PVAAGAPLVG DALARVTTGV ADVWSAATSG WVAGGLGGPG
PADPFLVVLA ALSALLGGEP RAAVGVLVLG GAVLAGVGAW AAAGAATRSV LVRAWAALAW
ASAPALLLAV GDGRVGAVVA HAALPWVALG LARAVGVQRV DQVLSAVATA RRSEDERDPD
AVAEARAARA AARAAGAHVT ARVPTDPAEV DVVTPVRGVA AVPTPRAPVS GAVPVTPAPT
TRDDAATDVP ALVGAPDPTG SVAAAAGAAL ALAVAVAAAP VLLVPAVVLV VVAALVVPRA
RVRVLGVLVP TLVLMGPFLV EVGSAGAAGV RLLLADPGPG APVAPAAPLA RALGVPADPA
VLVPGGLPDV LAAAWPYLPG AVLVVLAAVA LVRGASVARG VRVCWVAAAA GIAAGACVAA
APLAVTADTW APAWTGATVS LTTLGLLGAA VLGSDGLASR VAERSFGWRQ PLVAVATVLA
VVSVLCAIGG WAWTARSGEA LALRASTTPV VPVVGQQGAR SASSSRVLAL GVRADGSVDW
SMLRADGDQH VDHAAAGAAR GVTGPLDAPR PAPADAAASE VGALAARLVQ GAAGDVAAEL
GVLGVGDVLV PTPQDGSAAA RARLVGVLDA TAGLERVTHE GSGTLWRVRA TQGEAVVSWA
RTVPSARDVA DPLASAVAVA AQGRTVDTAV PPGDAGRVLV LAERADAGWR AWLDGRPLPT
VDGGWRQAFV LGPDAGRLEV RHHLPERTPW LVALGLTTLV TVLLAVPLRR RRGVRE
|
|---|
| |