Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_2230 |
Symbol | |
ID | 9146130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 2487777 |
End bp | 2488319 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | |
Product | Soluble ligand binding domain protein |
Protein accession | YP_003637320 |
Protein GI | 296130070 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0322679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00193797 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCTCGTGC TGGCGCTCGT CGCGGGCGGG ATCGTGCTGC GTGCGGCCGG CGCGCCGCGG GGTGAGCCCG TGACGATCCC CGTCCCGGCG CCGGACGCGA CGTCGCGCGC CGCGGGCGGT CCGGCAGGCG AGGAGGTGGT CGTGGTGCAC GTCGTCGGGG CGGTGGCGGC GCCCGGCGTC GTGCGCCTCA CGCTCGGCGC GCGCGTCGCG GACGCGGTCG CCGCGGCCGG CGGCAGCACG CCCGAGGCCG ACCTCGGCAG GGTCAACCTC GCACGCGTCC TCACCGACGG CGAGCAGCTC GTCGTCCCGG CGGCCGGTGC ACCGGCGTCC GAGCCCGCGG GGGCGCCGAC GGACGGCCTG GTGGACCTCA ACTCCGCGAC CGAGCAGGAG CTGCAGGAGC TGCCGGGCGT CGGACCCGTC CTCGCCGGGC GCATCGTCCA ACGGCGCACC GAGCGGCCGT ACGCGGCGGT CGACGAGCTG GACGAGGTCG CGGGGATCGG CCCCGCCCTG CTCGCGGACC TGCGGCCGCG GGTCCGCGTG TGA
|
Protein sequence | MLVLALVAGG IVLRAAGAPR GEPVTIPVPA PDATSRAAGG PAGEEVVVVH VVGAVAAPGV VRLTLGARVA DAVAAAGGST PEADLGRVNL ARVLTDGEQL VVPAAGAPAS EPAGAPTDGL VDLNSATEQE LQELPGVGPV LAGRIVQRRT ERPYAAVDEL DEVAGIGPAL LADLRPRVRV
|
| |