| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1934 |
|---|
| Symbol | |
|---|
| ID | 9145828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 2149572 |
|---|
| End bp | 2151740 |
|---|
| Gene Length | 2169 bp |
|---|
| Protein Length | 722 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_003637028 |
|---|
| Protein GI | 296129778 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCGA AGGCTCCCCT GGCCACCACG GTCGGCTGGT CCGACCTGGA CCTGCGCGCG
GTGGACACCA CCCGCGTGCT CGCGGCGGAC GCGGTCGAGA AGGTCGGCAA CGGCCACCCC
GGGACGGCGA TCAGCCTCGC CCCGGCGGCC TACCTGCTCT ACCAGAACGT GCTGCGCCAC
GACCCGACGG ACCCGCAGTG GCTCGGGCGC GACCGCTTCG TCCTGTCGGC GGGCCACTCC
AGCCTGACGC AGTACATCCA GCTCTACCTC GGCGGCTTCG GCCTGGAGCT CGAGGACCTG
CAGGCGCTGC GCACCTGGGG CTCCAAGACC CCGGGCCACC CGGAGTACCG CCACACGGCC
GGCGTCGAGA TCACGACCGG CCCGCTGGGC CAGGGCCTGG CCTCGGCCGT CGGCTTCGCG
ATGGCCGCAC GCCGCGAGCG CGGTCTGCTC GACCCCGAGG CGGCGCCCGG CGAGAGCCCC
TTCGACCACC ACGTGTACGT CATCGCCTCC GACGGCGACC TGCAGGAGGG CGTGACGAGC
GAGGCCTCGT CGATCGCCGG CACGCAGGAG CTCGGCAACC TCGTCGTGGT GTGGGACGAC
AACCACATCT CGATCGAGGG TGACACGTCG ATCGCGTTCA CCGAGGACGT GCTCGCGCGC
TACGAGTCCT ACGGCTGGCA CGTGCAGTCC GTCGACTGGA CCGCCGGCGG CGAGTACCGC
GAGGACGTCG ACGCGCTGCA CGCGGCGATC GAGGCCGCCA AGGCCGTCAC GGACAAGCCG
TCGTTCATCC GCCTGCGCAC GCTGATCGCG TGGCCCACAC CGGGCAAGAC CGACGACCAC
TCGTCGCACG GCTCGAAGCT GGGCGGCGAC GCGATCCGCG GCCTCAAGGA GATCCTCGGG
TTCGACCCCG AGCAGACCTT CGAGGTCGCC GACGAGGTCA TCGCCCACAC GCGCTCGCTC
GCCGGGCGCG CCGCGCAGGA CCGCGCCGGA TGGCAGCAGA AGTTCGACGC GTGGGCCGCG
GCGAACCCCG AGCGCAAGGC GCTGCTGGAC CGGCTCCGCG CCGACGAGCT CCCGGAGGGC
TGGGCCGAGG CGCTGCCGAC GTTCCCCGCC GGCAAGGCGG TCGCCACGCG TGCCGCGTCC
GGCGAGGTGC TCTCGGCGCT GGCCCCGGTG CTGCCCGAGC TGTGGGGTGG CTCCGCCGAC
CTCGCGGGCT CGAACAACAC GACCATGAAG GGCGAGCCGT CCTTCCTCCC CGCGCACCGC
TCGTCGCACG AGTTCGCGGG CGACCAGTAC GGTCGCACGC TGCACTTCGG CATCCGCGAG
CACGCGATGG GCTCGATCCT GTCGGGCATC CGGCTGCACG GCCTGACCCG CCCGTACGGC
GGCACGTTCT TCACGTTCTC CGACTACATG CGCGGCGCCG TGCGCCTCGC GGCGCTCATG
GGCGTCAACG TCACGTACGT GTGGACGCAC GACTCCATCG GCCTCGGCGA GGACGGCCCG
ACGCACCAGC CGGTCGAGCA CCTGACGGCG GTGCGCGCGA TCCCCGGCCT GGCAGTCGTG
CGCCCCGCCG ACGCCAACGA GACCGCGGCC GCCTGGAAGG CCTCGCTCGA GCGCACCGAC
GGTCCCGTCG CGCTCGTGCT GACCCGTCAG AACGTCCCGA CGTTCCCGCG CGGCGAGGAC
GGCTTCGCCA CGACCGACGG GGTCGCCAAG GGCGCGTACG TGCTGCTCGA GGCGTCGTCC
GGCACCCCCG ACGTCGTGCT GATCGCCACG GGCTCCGAGG TCCAGCTCGC CGTCGAGGCG
CGCGCGACCC TCGAGGCCGC GGGCGTCGCG ACGCGCGTCG TGTCGGCGCC CTGCCTCGAG
TGGTTCGCAG AGCAGGACGA GGAGTACCGC GAGTCGGTGC TGCCGTCGTC GGTCCGGGCC
CGGGTGTCGG TCGAGGCCGG CATCGCGCTG TCGTGGCACA AGATCGTCGG CGACGCGGGC
CGGACCGTCT CGATCGAGCA CTACGGTGCG TCGGCCGACT ACGAGCGCCT CTACCGGGAG
TTCGGGATCA CCGCCGAGGC CGTCGTGGCC GCGGCGCACG AGTCGGTCGC GGCGGCGCGT
GGGACGTCGG CGCCGTCCGA CCAGCCGGCC GCCCCGTCGC AGTCCGGCAC GGGCGACCTG
CCCGCCTGA
|
|---|
| Protein sequence | MNAKAPLATT VGWSDLDLRA VDTTRVLAAD AVEKVGNGHP GTAISLAPAA YLLYQNVLRH
DPTDPQWLGR DRFVLSAGHS SLTQYIQLYL GGFGLELEDL QALRTWGSKT PGHPEYRHTA
GVEITTGPLG QGLASAVGFA MAARRERGLL DPEAAPGESP FDHHVYVIAS DGDLQEGVTS
EASSIAGTQE LGNLVVVWDD NHISIEGDTS IAFTEDVLAR YESYGWHVQS VDWTAGGEYR
EDVDALHAAI EAAKAVTDKP SFIRLRTLIA WPTPGKTDDH SSHGSKLGGD AIRGLKEILG
FDPEQTFEVA DEVIAHTRSL AGRAAQDRAG WQQKFDAWAA ANPERKALLD RLRADELPEG
WAEALPTFPA GKAVATRAAS GEVLSALAPV LPELWGGSAD LAGSNNTTMK GEPSFLPAHR
SSHEFAGDQY GRTLHFGIRE HAMGSILSGI RLHGLTRPYG GTFFTFSDYM RGAVRLAALM
GVNVTYVWTH DSIGLGEDGP THQPVEHLTA VRAIPGLAVV RPADANETAA AWKASLERTD
GPVALVLTRQ NVPTFPRGED GFATTDGVAK GAYVLLEASS GTPDVVLIAT GSEVQLAVEA
RATLEAAGVA TRVVSAPCLE WFAEQDEEYR ESVLPSSVRA RVSVEAGIAL SWHKIVGDAG
RTVSIEHYGA SADYERLYRE FGITAEAVVA AAHESVAAAR GTSAPSDQPA APSQSGTGDL
PA
|
|---|
| |