| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1870 |
|---|
| Symbol | |
|---|
| ID | 9145763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 2081929 |
|---|
| End bp | 2082723 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Sec-independent protein translocase, TatC subunit |
|---|
| Protein accession | YP_003636966 |
|---|
| Protein GI | 296129716 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.921006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.256476 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGC GGGAGCACCT GCGCGAGCTG CGCCGCCGCG TCGTGCTCAT CGCGCTCGGC
CTGCTCGTCG GCGGCGTGGC CGGGTGGCTC GTGTACGAGC CCGTCTTCCA GCTGCTGCAG
CAGCCGATCC TCGACGTCGC CGAGGCCCGC GGGCAGCGCG TCTCCCTGAA CTTCCAGGGA
GTGGCGACCG CGTTCGACGT GCAGGTGAAG GTGTCCCTGT TCCTGGGTGT GCTGGTCACG
GCGCCGTGGT GGATCTTCCA GCTCTGGGCG TTCATCACCC CCGGGCTGAC CACCAAGGAA
CGCCGCTACG CGGTCGGGTT CCTCGCCGTG GCCGTGCCGC TGTTCTTCGC CGGTGCCGCC
CTCGCGTGGT GGGCCCTGCC CAACGCCGTG CGCCTGCTGA CCGACTTCGC ACCTGCGGAG
ACGACGAACT GGGTCGACGC GCAGCTCTAC CTCAGCTTCG TCATGCGGGT GGTCCTCGCG
TTCGGCGTCG GCTTCCTGCT GCCCGTGGTC ATGGTCGCCC TCAACTTCGC CGGCCTGGTG
CGTGCCCGCA CCTGGCTGGC GGGGTGGCGC TGGGCGGTGC TGCTCGCGTT CGTCTTCGCC
GCGATCGCCA CGCCGACGCC CGACGCCGTG ACGATGCTCG CCGTCGCGAT CCCGATCTGC
CTGCTCTTCG GTGCCGCACT CGGCGTGTGC GTGCTCCACG ACCGCCGGCT CGACCGGCGC
CTCGTCGCCC AGGGGCTGCC TCGCCTCGAC GGCACCGGAC CCGACGAGTC CCCGGCGCCG
GCGAGCGGCG CGTGA
|
|---|
| Protein sequence | MPLREHLREL RRRVVLIALG LLVGGVAGWL VYEPVFQLLQ QPILDVAEAR GQRVSLNFQG
VATAFDVQVK VSLFLGVLVT APWWIFQLWA FITPGLTTKE RRYAVGFLAV AVPLFFAGAA
LAWWALPNAV RLLTDFAPAE TTNWVDAQLY LSFVMRVVLA FGVGFLLPVV MVALNFAGLV
RARTWLAGWR WAVLLAFVFA AIATPTPDAV TMLAVAIPIC LLFGAALGVC VLHDRRLDRR
LVAQGLPRLD GTGPDESPAP ASGA
|
|---|
| |